Paramacrobiotus metropolitanus: 129588696
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Entry
129588696 CDS
T09028
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129588696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129588696
Enzymes [BR:
pmeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129588696
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129588696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
DUF7178
Motif
Other DBs
NCBI-GeneID:
129588696
NCBI-ProteinID:
XP_055339014
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MSWSKFPCSTSEVMLDFVLACGQSFRWTKNASGEWIGVIGRCAWKMKQTEECVEYQVFTQ
APQSAIQIAKRSRGFATGQDVADISGESGDHAVLKQYFAIDTFLQPLYAQWSAADERFAH
VAPRYGGIRILQQDFIENVFSFICSSNNNIARIQQMVEKLCARYGDLICEVDGKKMYAFP
AVERLAQEGVEEELRKMGFGYRAAFVHGAAKHIAGDSGWISRTKCADYPTAKELLMELPG
VGAKVADCICLMSLGHHQAVPVDTHVFSVTAQHYLPHLRQVKSVTKRVYNEIGEFYRNRF
GGMAGWAHSVLFTADLRQFKEAASDNGKVGNNNINKRKRRLVECD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtcgaaatttccttgctcgacatcagaggtgatgctggattttgtgctggca
tgtggtcaaagttttcgatggacgaagaatgcatcgggcgaatggataggagtcatcgga
aggtgtgcgtggaagatgaaacagaccgaagaatgtgtggagtaccaagtcttcacgcag
gctcctcaatccgcaatccagattgccaaaagatctcgtggatttgccaccggacaagat
gtagccgatatcagtggtgagtctggcgaccacgctgttcttaagcagtacttcgccatc
gacacatttctccagccgctttacgctcagtggtcggcagccgatgaacgattcgcccat
gttgcgccgcggtatggcggcatacgaattctgcagcaggatttcatcgaaaacgtcttc
agtttcatttgctcaagcaacaataacatagccagaatccaacaaatggtggaaaagctg
tgcgcgagatatggagatttgatctgtgaagttgatgggaagaagatgtacgcatttccg
gctgtcgaacgactggcgcaggaaggcgttgaggaggaactgcggaaaatggggttcggt
taccgggcagcgtttgttcacggtgctgctaaacacatcgctggggattccggatggatc
tcgagaacgaaatgtgctgattatccaacagccaaagaactgctgatggagcttcccggt
gtgggagcgaaggtggctgattgtatttgtttgatgtcactggggcatcaccaagccgtt
cccgtggacactcacgtgttttcggtcaccgcacaacactacttaccccatctgcgacag
gtgaaatcggtgacgaaacgcgtgtataatgagattggggagttttatcgtaatcgcttc
ggtggtatggctggctgggcgcattcggttctcttcaccgctgaccttaggcaattcaag
gaagcagccagtgataacgggaaagtaggtaataataatataaacaaaaggaagcgacgc
ctagtggaatgtgattag
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