Paramacrobiotus metropolitanus: 129589107
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Entry
129589107 CDS
T09028
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo00100
Steroid biosynthesis
pmeo01100
Metabolic pathways
Module
pmeo_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129589107
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmeo01006
]
129589107
Enzymes [BR:
pmeo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129589107
Prenyltransferases [BR:
pmeo01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129589107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Gasdermin_C
NCTSP_N
Motif
Other DBs
NCBI-GeneID:
129589107
NCBI-ProteinID:
XP_055339615
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MERDEKELCYQMLNQTGRSFSMVIATLGDQFQYSTCIFYLVIRALDTVEDDMTIPLDTKL
LLLRTFQQKLYVPGWNYRDSRSKDAVVLHNFHVISSQFRRLDKAVQCVISDTCRRMAAGM
AIFLEKGFVIDTFQEWNEYGRCASGLMCLGLTRLLEPFKPISSQREQLAHSLGRFLQKMN
IIRDFKEDTDDRRRLWPREVLVRTGNTHLTVDDLLQRANQQAALRCLNYLIGDALTHLPD
VLLYLNAIQTPTVFPFWAIPQVMAIATLERCYNNPQVFEGKVKILRGGTAMIVQNCTDMA
TTKDLLRIYALKIVARMECAGSSDEAKDFLAVLKTSGVLYSD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggacgagaaagaactatgctaccaaatgctcaatcagaccggtcgcagcttt
tcaatggttattgccacccttggcgatcaattccaatactcaacgtgcattttctacttg
gttatacgcgcactggacacggtcgaagacgacatgactattccgctggacaccaaactt
ctgctgttgcgcacctttcaacagaagctgtatgttcccgggtggaattatcgcgatagc
cggtcaaaggatgccgttgtcctccacaattttcacgtgatctcgtcgcagtttcgccgg
ctggataaggccgtccaatgtgttattagcgacacgtgccggcgcatggccgcgggaatg
gcgatctttctggagaaaggtttcgttattgacacatttcaagaatggaacgagtacggt
cgctgcgcttccggcttgatgtgcctcggtctgacccgtcttctggagccatttaagccg
atttcttcccaacgcgaacagttggcccattccctgggccgctttctgcagaaaatgaac
ataatccgcgacttcaaagaggacactgatgaccggcgccgtctatggccgcgggaagtt
ctcgtacgcaccggcaatacgcatcttactgtggacgatctgctccaaagagcaaaccaa
caagcagcgttgcggtgtctcaactatctgatcggtgatgccttgacacatcttccggat
gtgctgctttatctgaacgcgatccaaacacccactgtcttcccgttctgggccatcccg
caagtcatggccattgccacactagaacgttgctacaataacccgcaagtttttgagggg
aaagtgaagattcttcgaggcggaacagctatgatagtacaaaactgcactgacatggca
accacaaaggacttattacgaatctacgcactgaagatcgtggccagaatggagtgtgca
ggatcgagcgatgaggctaaagattttctggcagttttgaagacatccggcgttttgtac
tccgactga
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