Paramacrobiotus metropolitanus: 129589268
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Entry
129589268 CDS
T09028
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129589268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129589268
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129589268
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129589268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
Motif
Other DBs
NCBI-GeneID:
129589268
NCBI-ProteinID:
XP_055339900
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MAVNIAITAKRATASTGSALQIRDEEMPEVSPPRKWKQPELRDNQVYIPGDTVMENAEGW
MDGHGSYCSVLPEKRVQMLASVAGIRQIYTRVVVINPIRSRYIGEIGDIIVGRIIQVGRK
AWMVDVGAQRHGILNLGGINLPSGELRRKTEEDIGFMRGYLKEGDLISAEVQKTGADGRL
VLHTRSLRYGRLVHGMLLQVQPKLTRRGKGHFISYETFGVHLIIGVNGAIWIAPTQRQLN
IPLGLDQGEQVRTSGQQHFPEEEDIYVQLTDTDAKKVSVKMDDTGQIPSSTKSTSVAPLE
VRKCMARIRNCIGILDNERIPINRETIRILYDASMKYEAKYLLQSQIAKEIFLMARSELA
QEMPGAQRDT
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcaacattgcgatcactgcgaagcgggcaacagcgtcaactggtagtgccttg
cagatccgggacgaagaaatgcccgaagtctctccccctcggaaatggaagcaacccgaa
ttgcgcgataatcaggtttacatacccggagatacggtaatggagaacgccgagggttgg
atggacgggcatggttcttactgctctgtacttcccgaaaagcgtgtgcagatgttggct
tcggttgccggaattcgccagatctataccagggttgttgtgattaatcctatccgatct
cgttatatcggagagatcggtgacatcattgtggggagaataatccaagttggccgaaag
gcttggatggttgatgttggggcgcagcgccatggtatcctgaatttaggcggcataaat
ttgccgagtggtgaattgcggagaaaaacagaagaagacattggctttatgcgaggttat
ttaaaggaaggcgatctgattagcgcggaagtgcagaagaccggcgcggatggccgatta
gtccttcatacgcgcagtctccgttacggccgcctcgtgcacggcatgcttttgcaggtg
cagccaaaactaacccgccgaggtaaaggccattttatttcctatgaaacattcggagtg
caccttattatcggcgtgaatggtgcgatctggattgcaccgacgcagcgccaactcaat
atacctctcggactggatcaaggtgagcaggttcgaacgagcggacagcagcatttcccc
gaagaagaggatatctacgtgcagttgaccgataccgatgctaaaaaggtatccgttaag
atggacgatacagggcagattccctcatccacgaaatctacttccgtggctcctttggag
gtccgcaaatgtatggctaggatacgcaattgtattggcattctggataatgagcgaatt
ccaatcaaccgggaaactattagaattctgtatgatgcttcgatgaaatacgaagctaaa
tatttgctgcagtcgcagattgcgaaggaaatttttctcatggcaagaagtgaattagcc
caagaaatgccgggtgcgcaacgggatacgtga
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integrated database retrieval system
