Paramacrobiotus metropolitanus: 129589739
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Entry
129589739 CDS
T09028
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03420
Nucleotide excision repair
pmeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129589739
09124 Replication and repair
03420 Nucleotide excision repair
129589739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmeo04121
]
129589739
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129589739
Ubiquitin system [BR:
pmeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
129589739
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
129589739
TCR (transcription coupled repair) factors
Cul4-CSA complex
129589739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
129589739
NCBI-ProteinID:
XP_055340567
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MAVQPSPPQGCYYVATAYQSNVVKYAASGHFTTKDHLELLTVRTNYLELSRVDGDDLQDV
RQLNFSAAVSGLWAFRPEADSHHAVLILTRRHHLIMLQFENSSSGIKIVERGAGKFPSNA
DLILLESGPLAAFHYHPRTTICLALFRQRLEIIQFTSALKFETFPIRVDTHDIGGIVGLG
FLQPNENNYSLAILQTTIRMHEGLPLQGPLLTFSSLNMKTREKEKVESSFTKLDFEADLM
LVVDLPTEAPGVLVVGNGAVQYFNTKEYASAVSPFLTRAGVISSCELYRDTVRMVVTYLL
GYSDGRLVLVIYRHCPHNMEERIRLKLPPCKLNVELLGVAAVAQTLSVIGDGLVFLGSCA
GPGSLILRIRENINTETKNYFDVISTFPALGSVLELEVMKHSQKQGLDECSLLACTADTF
GNSLTIIRSGIKLEDPMEIPLCGMVNVWCVKFPALNSEDVFVFSTLTDTRCAILQSEDLC
ELDVPVDGAFTTNSRTLLCDALIDYNEPSILQVTPISVVLIKREINTVISELKFHEEVIS
KAKLCDQVLVICRGRKIEVISFADKAHPQCTKIYECGNEICGLEVFPGPTGSLFCAVGEW
QSFNVSVLKVADGEVIESNLVPDARSLPRSLTFCNFGPASFLFCGFGDGSVTYFRFDTAT
LRMFDPKRVAMGTRPFAFVRFPVHDSQNVFVCSDRPCVISFRNGRLSFANVNIPNVVDIC
SLEGLDNAALDPESLMIVTNESLLVGQLEDIQKLHLIPLPLGFQAFQFAYQADSHMFGVI
GDRKDCRVNRFSSAKPTYEEEEERVLYILDRNSFEVVTSYRNDDREEYICCICSWNPEET
SYFIMGTEKKVEAANDVGFVLRGSVFVLQLINSRLQVILSYSCNQPVHFVSPYGKYLLAA
GETELYLYEWLGHQIDLCHRFETGGAMISSLDVLGNTILIGDMHKSVILLQYNKDQGLSV
TGREQSSYFLQNAALIDETTAIVSDDWGNLAAMKFTGKKLKSALLEEDNCQIMDMIAGIN
MCDLVTTIQRGMLIPEDSVGECSIKIRNSLVFGTSKGQLGVVFELDSELFSLLAYIESQM
MKQKRDRALNAADAAEAMKFYNGLMEADHFGFVNGDLVETFLHLRPDEMSKILKGFKGPV
KDGKVQRYSVADVTKFLDDLVRLH
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccagccttcgccaccgcaaggctgctactatgtggccacagcttaccagagc
aacgttgtgaagtacgccgccagtggtcatttcacaacgaaggaccatttagagttgctg
acggttcggacaaattatctggaattatcgcgagtagatggcgatgatctgcaggatgtc
agacagctcaatttctccgccgctgtcagtgggctgtgggcatttcgccctgaagccgac
agccatcatgctgtcttgattctcactcggcggcatcatctgattatgttgcagtttgaa
aactcttcttcgggaatcaaaatcgttgaacggggcgcgggcaaatttcccagcaatgct
gatctgattctactggaaagcggtcctctcgctgcctttcattatcatcctcgcaccaca
atctgtcttgcattgttcaggcagcgactggaaattatccagttcacatcggctcttaaa
tttgagacatttcccatccgtgtggatacgcacgatatcggtggcatcgtcggactggga
tttctacagcctaatgaaaataattattctctggccatcctacagaccaccatcagaatg
cacgagggtctacccttgcaggggccgctgttaacgttttcctcccttaatatgaaaacc
agggaaaaggagaaggttgaatcgtcatttacaaagttagacttcgaagcggatttgatg
ctggttgtggatctcccgacggaagcaccaggtgtgctggttgttggcaacggtgcagtg
cagtatttcaacacaaaggagtacgcgagcgccgtttccccgtttttaacacgtgcagga
gttatatcttcgtgcgagctgtacagggatactgttcggatggtcgtgacgtacttgttg
ggatacagtgacgggcgacttgtgttggtaatttatcgccattgtccacacaacatggag
gagcgtattcgcttaaaacttcccccttgtaaattgaatgtggaactcttgggtgttgcc
gcagttgcacaaacgctgtctgttattggcgatggtctagtgtttctgggctcatgtgca
ggccctggatctcttatcctccgtattcgcgaaaacattaacacggaaacgaaaaactat
ttcgatgtgatttctacatttcctgcattgggatcggttttggagttggaggttatgaag
cactcacagaaacaaggtttggacgagtgctcgttgttagcttgcacggccgataccttt
ggcaacagtctgactataatacgcagtggcataaaactggaagaccccatggaaattcca
ttgtgcggcatggttaacgtatggtgcgttaaatttcccgcattgaattcagaggatgtt
ttcgtgttctcaacactgactgatacgcgttgtgccatactgcagtctgaggatttgtgc
gaactggacgttcctgtcgatggcgcttttacaacaaacagtcggactctcctgtgtgat
gcgttgatcgactacaacgagccttcaatcctgcaggttacaccgattagcgttgtgcta
ataaaacgagaaattaatactgtgattagtgaactgaaattccatgaagaagtgatatcg
aaggcaaagttatgcgaccaagtgcttgtgatctgccgcggtcggaaaatagaagttata
agtttcgctgataaagcccatccacagtgcacaaaaatctatgaatgtggaaatgaaata
tgtggccttgaagtttttcccggcccaacgggatcgttattctgtgctgtcggcgaatgg
cagagctttaatgtgtctgtgttgaaagttgccgatggggaagtgatcgaatcgaatttg
gttccggatgcgcgctcactacctcggagcctgactttctgcaattttggtccggcgtct
tttctgttctgcggatttggtgatgggagtgttacgtatttccgatttgatacagcgacg
ttgcgaatgttcgaccccaagcgtgttgcaatgggcactcggccgttcgcttttgtcaga
tttcctgtccacgacagtcagaatgttttcgtatgctccgatcgaccatgtgttatctcg
tttcgtaatggacgactgagttttgccaacgtgaacattcctaatgttgttgatatttgt
tcattggaaggactggacaatgccgcattagatccagagagtcttatgattgttaccaat
gaatcactgcttgttggccagctggaggatatccaaaagcttcacttgattccgttgcct
ttgggctttcaggcttttcagtttgcttatcaggctgattcgcacatgtttggtgtcatt
ggtgaccggaaggattgtcgtgtaaatcggttttccagtgctaaacccacatacgaggag
gaggaagagcgtgtgctgtatattctcgatcgaaattcttttgaagtggtcacttcctat
cgaaacgacgaccgagaggaatatatctgttgcatttgcagctggaatccggaagaaaca
tcttattttatcatggggacggagaaaaaagtggaagccgcgaatgatgtgggttttgtg
ttgcgtggttcggtttttgtgctgcagctcattaacagtcgtttgcaagtgatattaagt
tacagctgcaaccaaccagttcattttgtatcgccatacggaaaataccttttagctgct
ggcgaaacggagttatatttgtatgaatggttggggcatcaaattgacctttgccataga
ttcgaaacgggaggcgcgatgatttccagtctggatgtactcgggaatactatcctaata
ggcgacatgcacaaatcggtgatcttgcttcagtataataaggatcaaggcttaagtgtt
actggacgagaacagtccagctactttttgcagaatgccgctttaattgacgagactact
gcgatagtatcggatgactggggaaatttggctgccatgaaattcactggaaaaaagctc
aaaagtgcgctcctggaagaggataattgtcagattatggacatgatcgctggtatcaac
atgtgtgatctggtgactacaattcaaagaggcatgcttataccagaagattctgtgggg
gaatgttccattaaaattcggaacagtttagtttttggaactagcaagggacaacttggt
gtggttttcgaattagacagtgaattgttctccttgctggcatatatcgagagtcagatg
atgaagcagaagcgtgaccgagcgctaaatgccgctgatgctgctgaagctatgaaattc
tacaatggactgatggaagcggatcattttgggtttgtcaatggagatcttgtagagaca
ttcttgcatttgcgaccggatgagatgtctaagatattgaaaggattcaaaggacctgtt
aaggatggaaaggtccagcgctatagcgttgcggatgtgacgaagtttttggatgatttg
gtgcggctgcactga
DBGET
integrated database retrieval system
