Paramacrobiotus metropolitanus: 129590809
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Entry
129590809 CDS
T09028
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04382
Cornified envelope formation
pmeo04512
ECM-receptor interaction
pmeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129590809
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129590809
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129590809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmeo04147
]
129590809
00536 Glycosaminoglycan binding proteins [BR:
pmeo00536
]
129590809
Exosome [BR:
pmeo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129590809
Glycosaminoglycan binding proteins [BR:
pmeo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129590809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
DUF1430
Motif
Other DBs
NCBI-GeneID:
129590809
NCBI-ProteinID:
XP_055342175
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MKRHVLQRIFGMSQFMASHSVIFWIFSTSFLLSLYSVNAQNRDDFAYGSGYPGNGRAEYV
RDCNGRDCSACGCYGEKGSRGPPGPIGPAGERGLQGHPGPEGLSGSRGDKGAMGFPGAMG
LKGDRGRTGVPGFPGINGIPGIPGPQGPRGYPGRDGCNGTDGPPGPPGPGGNGGGYGAPG
PQGPKGDKGEAAIVFPGAKGIKGDEGAPGQPGSPGQPGYDGQAGPRGDAGEPGLPGQPGP
RGLPGVAGGMGIGVQGPKGAMGEAGPPGAPGVGCSDRGELWAYNSSCIVNPGAQGPRGDK
GEPGTPGTRGFDGQPGQPGIPGSPGQTGEKGIRGPVGPRGKEGRPGQQGNYGAKGDSGFP
GNPGLPGPKGDRGSTGDAGFPGAKGDRGAPGIPGGAGRAGPAGPRGLTGPKGDRGAPGED
GLSGLPGGPGQRGFPGGPGLPGIPGAEGPAGVKGDKGDRGFPGSAGLSGTPGRPGVPGAK
GEPGFKGEPGLPIRGPPGLDGLPGNDGLVGPKGDMGPKGDRGFPGDSPDAIPGPPGSPGA
KGDRGPGGPPGRPGLDGRIGPKGDRGGSCQDCQPGQKGEKGDRGFEGRSGGPGERGAPGP
EGQLGERGEDGLPGLPGLTGAPGIPGVPGFKGDKGDRGLDAVVSPDVARGASGPKGDKGD
IGFPGLPGPLGQPGSAGAPGLSGQPGLRGAKGDRGFPGAPGAPGSPGVQGATGPRGAPGI
GLLGPPGTPGDMGLPGQNGFPGAKGDKGEPAERGARPEILIPKGDRGEPGAPGQPGTPGL
PGFKGDLGQPGLPGAFGPKGDRGLPGQFGAPGERGLPGIRGDKGDRGGPGMPGAGGAPGQ
DGVVGLPGPKGHKGDAGRSQIGQPGQPGTPGGPGAKGDKGQVGYPGQPGLPGATGPKGDA
GRPGQDGLPGLMGMKGGRGEPGYGVPGPQGPKGDRGLNGQPGLPGAKGDSGFPGQPGRVS
AKGDRGDAGRPGQPGNAGAPGSAGSPGLPGAPGLPGAAGFKGDAGAPGRPGVGGGPGLPG
LPGQNGAKGDRGLPGREGQSGQPGLPGAKGDGGFPGQPGAKGEPGQAALMGPKGFKGDSG
LPGAPGLPGQPGLPGQAGIKGDAGIPGQGQPGRPGPSGEPGLPGGAGAPGAKGDRGSAGL
PGLPGGRGYKGDAGQPGIPGQPGLSGVPGPKGDQGGPGAPGYPGAKGDRGQAGFPGIGGA
KGDAGTPGTPGLPGQPGFSGAKGDRGFAGQPGLPGGEGAKGDAGLPGGPGFPGAKGDRGI
PGQPGLGGIKGDAGLPGREGQPGNAGLPGQPGLPGQRGQPGIPGAAQPGPKGDAGLAGQP
GLPGQAGFKGDRGAPGLDGQPGAPGIPGIGRPGLPGPKGDSGLNGMPGAPGLPGQRGQPG
QPGFGGAKGDRGSPGLPGTATQIGPQGPKGDRGLDGAPGLPGVGGAKGDRGIPGLGGVPG
IKGDRGFAGQPGQPGFPGQNGPKGDRGAPGAPGIHRDALLGPKGDRGVPGMRGLDGRPGG
PGMPGLPGVKGDIGPRGSDGLQGPPGLPGGRGNPGLMGSPGERGNPGLQGPPGVPGAPGG
ALSYQTGFLLVRHSQSEAVPMCPSGLTQMWTGYSLLYIEGNEKSHNQDLGGAGSCLQRFS
TMPFMFCDVNNVCNYASRTDKSFWLSTTAPLPMMPIDGNELQQYISRCVVCEAPANVIAV
HSQSLDVPDCPSGWRGLWIGYSFAMHTGAGAEGGGQQLASPGSCLEDFRTTPFIECNGGR
GTCHYYANEFSFWLSTVDDNNQFGRPESQTLKAGNVRSRCSRCQVCQRIV
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccatgtcttgcaaaggattttcgggatgtcgcagtttatggcctcacatagc
gtgatattttggattttttccacgagttttttattatccctgtattcggtaaatgcccaa
aaccgagatgatttcgcgtacggaagcggttatcccggaaatggccgggcagagtacgta
agagactgcaacggccgggattgctccgcatgcggatgttacggtgaaaagggttccagg
ggtccgcctggacccattggacctgcaggcgaacgcggtctccaaggtcaccccggtccg
gaaggactttccggctcgaggggcgacaagggtgccatgggctttcccggtgcaatgggg
ctgaaaggagacagaggacggacaggagttcctggatttcctggtatcaacggaattccg
ggcattcctggtccgcaaggtccaagaggttatccaggaagagacgggtgtaacggcacg
gatggtccacctggaccgcctggtccaggtggaaatggtggtggctacggtgcgcctggt
ccacaaggaccgaaaggtgataaaggtgaagccgcgattgtatttcctggagcaaagggc
ataaagggcgatgaaggcgctcctggtcaaccaggctctcccggtcaaccgggatatgat
ggtcaagcgggaccgcgaggtgatgcaggagagccaggattaccgggacaaccgggaccc
cgtggcctgccgggcgttgccggaggaatgggaatcggtgtacaaggtcccaagggagcc
atgggtgaagctggccctcccggagcaccgggcgtcgggtgctcggatcgtggtgaactg
tgggcttataacagttcctgtattgtcaaccctggtgcacagggcccgcgtggagacaaa
ggtgaaccaggtacaccgggcacacgaggatttgatggtcaacccggtcagcctggtatt
cccggttcaccgggacagaccggcgagaagggtattcgcggtccagtgggtccccgaggc
aaagaaggtcgcccaggtcaacaaggaaattacggagctaagggtgatagcggtttccct
ggtaatcccggattacccggacccaaaggcgaccgcggcagtacgggtgacgccggattc
ccaggtgccaaaggtgatcgtggtgctccaggtattccgggtggagcaggaagggcagga
ccagccggaccacgggggttaactggaccgaaaggagatagaggagccccaggagaagat
ggtctatcaggccttcccggtggtcctggccaaagagggttccctggcggccctggcctt
cccggtattcctggagcagaaggtccagcaggagtcaaaggtgacaagggagatcgcggt
ttccccggatcggctggtctgtccggcactccaggtcgtcctggtgtccctggggccaag
ggcgaacctggattcaaaggagagcctggtctgccaattcgtggtcctcctggcttggat
ggtttgcccggaaatgacggtcttgttggaccaaaaggtgacatgggtccaaagggtgac
agaggattccccggagactcacccgatgccatccccggcccaccaggatcacctggagcg
aaaggtgacagaggccccggtggtcctcccggccgaccgggcttggatggtcgaatcgga
cccaagggagaccgaggtggaagttgtcaagactgccagccgggccagaagggtgagaaa
ggagaccgtgggttcgaaggacgcagtggtggcccgggtgaacgaggtgctcctggacca
gaaggtcaactcggtgaacgcggtgaagatggtctccctggcttgcctggattaactggc
gctccgggtattccgggagttccaggatttaagggagacaagggtgatcgcggcttggat
gcagttgtttcaccggacgtcgctcgtggtgcttctggaccaaagggtgacaagggtgac
attggtttccctggcctgccaggaccgctcggtcaacctggttcggctggagctcccggc
ttgtccggacaaccgggattgcgcggtgccaaaggagatcgtggtttcccaggagccccg
ggcgctccaggatctcctggtgtgcaaggtgctaccggtcctcgaggagcacctggcatt
ggcctgctcggcccaccgggcacacctggtgacatgggcttacctggacaaaacggtttt
cccggagcaaagggagacaaaggtgaaccggccgaaagaggcgcacgtccagaaattttg
atacctaaaggcgaccgaggcgagccgggcgcacctggacaacctggcacaccaggcctt
ccgggatttaaaggtgacttgggacagcccggactgcctggcgcgtttggtcctaaaggt
gatcgtggcttaccaggccaatttggcgctcccggagaacgcggtcttcccggaatcaga
ggcgacaaaggtgatcgtggtggtcctggcatgccaggtgctggcggtgcacctggtcag
gacggtgttgttggattgcccggacccaaaggtcacaaaggtgatgccggacgatctcaa
atcggtcaacctggtcaacccggaacaccgggtggacctggagcgaagggcgacaaagga
caagtaggctatcccggacaaccaggcctgcccggcgccactgggccaaaaggggacgcc
ggccggcccggtcaagatggattacctggtttaatgggtatgaaaggtggacgcggtgag
cccggctacggtgttcctggcccacaaggtcccaaaggagatcgtggtcttaacggccag
ccaggcttgcctggagcaaaaggagactccggattccccggacagccaggcagagtctcg
gccaaaggtgacagaggtgatgcaggtcgacctggccaacctggaaacgcaggagcgcct
ggaagcgccggctcgcctggactacccggcgcccccggtttgcctggtgcagcaggtttc
aagggagatgctggtgcacccggtaggcctggagttggaggcggtccaggactgcctggt
cttcctggacaaaacggtgcgaaaggtgaccgaggtctacccggtcgagaaggacagtcc
ggccaaccaggactgcctggcgccaagggagacggtggattccctggtcaacctggtgcc
aaaggtgaacccggacaagccgctcttatgggaccaaaaggcttcaaaggtgactctgga
ctgcccggtgcgcctggactccctggtcagccaggactgccaggccaagctggaatcaaa
ggcgacgccggaattccaggacagggacaacccggacgacctggtccgtctggagaaccc
ggtcttccaggcggtgctggtgctcccggagctaaaggagatcgaggcagcgctggcctg
ccgggtctgcccggaggtcgtggatacaaaggtgacgctggccagccaggcatacccggt
caaccaggcctttcgggagtgccaggtccaaagggtgatcagggcgggcccggggcgcct
ggctatccaggtgccaaaggtgatcgcggtcaagctggattcccgggtattggtggcgca
aagggagacgccggaacccctggaactcctggtctaccaggacaaccaggattttctggc
gcgaagggagatagaggctttgctggacagccaggtcttccgggtggcgaaggagctaaa
ggggatgccggactacctggtggtcctggattccccggcgcaaaaggcgatcgtggcatt
cctggccagcctggtcttggtggcattaagggtgatgccggtctacctggacgcgaaggt
caacccggaaacgccggcctacctggccaacctggtttaccaggccaacgtggccagcca
ggtattccgggagctgcgcagcccggaccaaagggtgacgcaggtttagctggtcaacct
ggtttaccaggacaagctggatttaaaggagatcgaggtgcccctggtcttgacggacag
cccggtgctcctggtattccaggcatcggacgacccggcttgcccggaccgaaaggtgac
agtggacttaatggaatgccgggtgcgcctggtctgccaggacagcgcggtcagccgggt
cagcctggatttggcggggcgaagggagacagaggttctcctggtcttcctggaacagcc
actcagattggaccacaagggccaaagggtgatcgcggattagacggtgctccgggcttg
ccaggcgtgggtggtgccaaaggtgatcgaggtattcccggacttggtggtgtccctggc
atcaagggtgacagaggattcgctggccaacctggacaacccggcttcccaggtcaaaac
ggccctaagggtgacagaggtgcccccggcgcaccaggtatccatcgtgatgcgttgcta
ggacctaagggagaccgcggagtgcccggaatgagaggacttgatgggcgtccgggaggc
ccaggaatgccaggattaccaggtgtgaagggagatattggaccacgtggttcggacggt
ttgcagggaccacctggcttgccgggaggccgcggaaatcctggattaatgggatctcca
ggagaacgcggcaatccaggtctacaagggcctcctggtgttcctggagctccgggtggt
gctctttcgtatcagaccggcttcttgcttgtccgtcactcccaatcggaagccgtacca
atgtgtcccagcggtctcacacagatgtggactggctactctttgctgtacatcgaagga
aacgaaaagagtcataatcaagatcttggtggagctggttcgtgcctgcagagatttagc
acgatgccatttatgttctgtgatgtgaacaacgtgtgcaattatgcctcgcgaaccgat
aagtcattctggctgagtaccacagcacctcttccgatgatgcctatagacggcaacgaa
ctgcagcagtacatcagtcgctgcgtagtatgcgaggcaccggccaatgttattgccgtg
cacagccagtctctggatgtgccggattgcccatccggatggagaggtctatggattggt
tacagctttgcaatgcacactggcgctggtgccgaaggtggcggacagcaacttgccagc
cctggatcttgccttgaagatttccgaacaactccttttattgaatgtaacggcggtcgg
ggtacttgccattactatgcgaatgaattttcgttctggttatcaactgtggatgacaac
aatcagttcggtcgaccggagagtcaaacgctcaaagccggaaatgtccgttctcgttgc
agtcggtgtcaagtctgccagcgcattgtttaa
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