Paramacrobiotus metropolitanus: 129591215
Help
Entry
129591215 CDS
T09028
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03013
Nucleocytoplasmic transport
pmeo03015
mRNA surveillance pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129591215
09122 Translation
03013 Nucleocytoplasmic transport
129591215
03015 mRNA surveillance pathway
129591215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129591215
03041 Spliceosome [BR:
pmeo03041
]
129591215
03009 Ribosome biogenesis [BR:
pmeo03009
]
129591215
03012 Translation factors [BR:
pmeo03012
]
129591215
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129591215
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129591215
mRNA cycle factors
Stress granule specific factors
129591215
Spliceosome [BR:
pmeo03041
]
Complex C
Other components
EJC/TREX
129591215
Ribosome biogenesis [BR:
pmeo03009
]
Eukaryotic type
90S particles
Helicases
129591215
Translation factors [BR:
pmeo03012
]
Eukaryotic type
Initiation factors
eIF-4
129591215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
UvrD-helicase
Helicase_RecD
AAA
SLFN-g3_helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
129591215
NCBI-ProteinID:
XP_055342764
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MAAAAASITTKRRALLDEDLANVDFETSEDVEVVPSFDTMGLREDLIRGIYAYGFERPSA
IQQRAIKPVVKRRDVIAQAQSGTGKTATFSIAVLQNLETQINETQALILSPTRELAQQIQ
KVILALGDHMKVQCHACIGGTSVGEDISKLDRGQHVVSGTPGRVLDMIKRKNLRTRNIKI
LVLDEADEMLNRGFKEQIYDVYRHLPPDTQVVLLSATLPHEILEMTSKFMTDPIRILVKR
DELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRDANFT
VSSMHGDMPQKERDTIMREFRNGSSRVLISTDVWARGIDVQQVSLVINYDLPNNRELYIH
RIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVQDLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgcggcgtctataactaccaagcgacgtgcccttctggatgaagacctt
gcgaatgtggacttcgaaacgagtgaggacgtggaagtggtgccgtccttcgataccatg
ggacttcgagaggatcttattcgcggcatctatgcgtatggtttcgagagaccttcggcc
attcagcagcgagccataaaacccgtcgtcaagaggcgtgatgtcatcgcgcaggcacag
tccggcacgggcaagacggcaaccttttctattgcggttctccagaacttggagacgcag
attaatgaaactcaggctcttatcctttctcctacccgcgaactggcgcagcagatacag
aaagtcattctggctctcggggaccacatgaaagtgcagtgtcatgcttgcattggcggg
accagcgttggggaggatattagtaaactggaccgaggacaacatgttgtcagtggaacg
ccaggacgtgttctggatatgatcaaaaggaaaaatctgcggactcgcaacatcaaaatt
ctggtgctggacgaagccgacgagatgctgaaccgcggcttcaaggagcagatctacgat
gtataccgtcatttgccgcctgatacgcaggtggttctactgtccgctaccctgccgcat
gaaatcttggaaatgacatccaagttcatgacggatccgatccgcatcctggtcaaacgt
gatgaattgacactcgaaggcatcaaacaattttttgtggccgtagaaaaagaagaatgg
aaatttgatacactatgtgatctctatgacacgctgaccatcacgcaggctgtcatattt
tgcaatacaaaacgtaaagtggactggctgacggagaagatgcgagatgctaatttcact
gtgtcgtccatgcacggcgatatgccgcagaaggagcgcgatacgattatgcgggaattc
cgcaacggcagcagtcgggtgctcatctccacagatgtgtgggcgcgtggcattgacgtc
cagcaggtgtcgttggtcattaattacgatctgccgaataaccgtgaactgtacattcat
cgtattggccgatccgggcgttttggacggaaaggggtggccatcaacttcgtgaagagc
gacgatattagaattctgcgagatatcgaacagtactactccacgcagattgatgaaatg
ccgatgaacgtccaggatcttatctaa
DBGET
integrated database retrieval system
