Paramacrobiotus metropolitanus: 129591541
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Entry
129591541 CDS
T09028
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03020
RNA polymerase
pmeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129591541
09124 Replication and repair
03420 Nucleotide excision repair
129591541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129591541
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129591541
Enzymes [BR:
pmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129591541
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129591541
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129591541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Ribosomal_L36e
Motif
Other DBs
NCBI-GeneID:
129591541
NCBI-ProteinID:
XP_055343184
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MANNKSVYCNGRRSAPSDADQDMELDSRPTKNDLICDGDGPSMEVMVDEDQTAVVRTNGV
AAERNAMDTEDAVPDGIADPFAFVEAAMTNSDFVDLAAVAAAQEEPTEVVTDELLLSKNQ
LTPEEYDAYAAPNLKGAYFRATGVVRQQLESYSKFIENGIQKVIDDTKPIEIVQEVTHKK
GVAEQPAVYTYTFKQVFIHPRPVFWDINNDKRMMTPSECRLRNMTYASPLYVDIEETIYD
PSSKPERTRIKHEKCFLGKVPMMVGSGYCMLAGLLDKEMAIMGECAMDPGGYFIIDGSEK
VIIAQERLASNEIRVCRSREAKYNWIAEIRSIAKNSTKAPNILQLKMHKRNKEILGMTTL
GHPIVAVLPFVRQPIPVVILFRALGCESVKDILEHIVCENLEDLVRLSEKRNVKISEKTK
LVMDWMEASITDSLAIETQDLALNFIGNRATQPGVHREERMRFAEDLLNTYFLPHMGTRA
ENAKVKAYFLGHMIMRLLDTALSTRDVDDRDHYANKRLDLAGPLMTAQFRQCFLKMCAEL
RKKMQPYVNKRKKVAIPVLIKSSVITDGMRYFLSTGNGLANMTGRVGVAQVLNRLTYCAT
LSHLRRVNTPMTHETRLAAPRLLHNTQWGIVCPSETPEGQACGLVKNLALMAFITPGSSD
ADSQIAELLEQWPFDPLFSISPSEILSGTKVFLNGTWLGIHRNPTAFVTHVRSLRRRGVI
HKEVSILQDFANREICIYTDAGRAARPLLVVDEEKQALRFTKTELMLLTNKDLYMNEPFG
WNELLSEGFVEYIDVHEEEYIMCAMHPRDFSRNRGYCHTYTHCEIHPSMILGVCASIIPY
PDHNQSPRNTYQSAMSKQALGVYATNFNTRMDSEAQILHYPQRPLVETASMSHLRFRDMP
AGINCIVAIASYTGYNQEDSVILNAAAVQRGMFRHTLYTSYQAKEGMSTYRKNMEEIEVP
DPDECDGMRPVMYEKLDDDGIIEPGVRVSASDAIIGKTTTTGSRARPLSDEEVNPEMSTE
KPKKDTSVLLRSSETGIVDQVMVSMNVEGNKFCKVRVRSVRTPVMGDKFASRHGQKGTVG
IIYPTEDMPFTSEGVTPDIIINPHAIPSRMTIGHLLECLQGKASAVQGIYGVGTPFESPE
VKEIAAILKDKQYNQYGNEVMYNGFSGMKLTSQVYIGPTFYQRLKHLVENKMYARARGAV
TVLCRQPQEGRARGGGLRFGEMERDCLISHGAALNLRERLFEVSDPYRVHVCDKCGLIAV
ANLTNRTFECRRCVRKVDVSQITIPYACKLLFQELMCMGISPRILF
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacaagtctgtgtattgcaacggaagacggtctgcgccgtccgatgctgat
caggacatggaacttgacagcagaccaacaaagaatgatctgatctgtgatggtgatggg
ccatccatggaagtgatggtcgatgaagaccagactgctgttgtgcgtacaaatggtgtt
gctgcagagagaaacgccatggacacggaagatgcagtgccagatggcattgctgatccc
tttgcctttgtggaggcagccatgaccaacagcgatttcgtggatttggctgctgtggcc
gccgctcaagaagagcccacggaagtcgtgacggacgagctcctgctgtcgaagaaccag
ctaacaccggaggagtacgatgcgtatgctgctccgaatctgaaaggcgcctatttccgt
gcaacaggcgtggtacggcagcaactggagtcgtacagtaaattcatcgaaaacggcatc
cagaaggtgatcgatgacaccaaacccattgaaattgtccaggaggttactcacaagaag
ggcgtcgcggaacaaccggctgtgtatacgtacacattcaagcaagttttcattcaccct
cgcccggttttctgggacatcaacaatgacaaaagaatgatgacacccagcgaatgcaga
ctaagaaatatgacctatgccagcccactctacgttgacatcgaggagactatatacgat
ccctcaagcaagcccgagagaactcggataaaacacgagaaatgttttctcggcaaggtt
cccatgatggtgggctcgggatactgtatgctagccggacttttagataaagaaatggcg
atcatgggcgagtgcgcgatggatcccggtggatatttcataattgatggctctgaaaaa
gttattattgcccaggagagactggcgtcgaatgaaatccgcgtttgcagatctcgggaa
gcgaagtataactggatcgccgaaattagatccatagcaaaaaactcgaccaaagcgccg
aatatattgcagctgaaaatgcataagcgaaataaggagattttgggcatgacaacattg
ggacaccctatcgtagccgtcctgccgtttgtcaggcaaccaattcccgtggtgatcctg
tttcgcgcgttaggctgtgaatccgtgaaagacatcctggagcacattgtgtgtgaaaac
ttagaagacttggttagactttccgagaaaagaaatgtgaagatttccgagaaaaccaaa
ttggtgatggactggatggaggcatccataacggacagtctagcgatcgaaactcaggat
ctggcactgaattttatcggtaaccgtgccacccagccaggtgtgcatcgagaggaacgg
atgagatttgctgaggatctcttgaacacttattttctgccgcacatgggaaccagagct
gaaaatgccaaggtcaaggcttattttctcggccacatgatcatgcgtctgctggacaca
gctttgagtactcgcgatgtggacgaccgggatcattatgccaataaacgtttggattta
gctggtcccttgatgactgctcagtttcggcagtgttttctgaaaatgtgtgctgaactt
cgaaagaaaatgcagccatacgtgaacaaacggaagaaagtcgccatccccgttctcatc
aaaagctctgtaattacggatggaatgcggtattttctctcaaccggaaacggtcttgcg
aacatgacaggacgtgttggagtggcgcaagtgctaaatcggctgacgtattgtgctacg
ctatcgcatttacgacgggtgaacacaccgatgacccacgaaacccgtctagccgcaccg
cgcttattgcacaacacgcaatggggtattgtgtgtccatcggagacgccggaaggacaa
gcgtgtggattggtgaagaacttggcgttgatggcctttataactcctggttcctccgat
gcagattcccagattgcagagttattggaacagtggccctttgatccattattcagcatc
agtccttcagaaattttgtctgggaccaaggtgtttttgaatggaacctggctggggatt
catcgtaatcccactgcgttcgtaactcatgtcagatcactccggcgtagaggagtcatt
cacaaagaagtgtcaattctgcaagatttcgcaaatcgcgaaatttgcatctatacggac
gccggccgagcggctcggcctttgttggttgttgacgaggaaaaacaagcgctgagattt
acgaagaccgagttgatgcttttgacgaacaaggatctgtacatgaacgaaccgtttggg
tggaatgaattactttcggaggggtttgtggaatacattgacgttcacgaggaggagtac
atcatgtgtgccatgcatccacgggatttctctcgcaaccggggatactgtcatacgtac
acccactgtgaaatccatccttccatgatcctgggtgtctgtgcctcgatcatcccttac
ccagatcacaatcagtcaccgcgtaatacctaccagtcggccatgtccaagcaggctctg
ggtgtctacgcaaccaatttcaacacccgcatggacagtgaagcgcaaatattgcattat
ccccagcgaccgctcgttgaaacagcttccatgtcacatttacgtttccgcgacatgcca
gccgggatcaactgtattgtcgccattgccagctacacgggctacaaccaggaagattcc
gtgattttgaatgccgccgcggtccaacgggggatgtttcggcacaccctgtacacgtcg
tatcaggccaaggagggcatgtcgacgtaccggaagaacatggaagaaattgaagtgcct
gatccggatgaatgcgacggaatgcggccggttatgtacgaaaaactggacgatgatggc
attatcgagccgggagtgcgggtgtcggcaagtgatgcgattattggaaaaaccacaacc
accggatcgcgagctaggcctttgtcggatgaagaggtaaatccggaaatgtcaacagag
aagcccaagaaggacaccagcgtcctgcttcgctcatcggaaacgggtattgttgaccag
gtgatggtgagcatgaatgtggaagggaacaaattctgcaaagtacgggtccgctctgtg
aggacgccggtaatgggagacaaattcgccagccgccacggacaaaagggaactgttggt
atcatatatccaaccgaggatatgcctttcacgtcggaaggtgtaacaccggacattatc
atcaatccgcacgctattccgtcccgtatgaccattggtcatcttctggaatgtctccag
ggcaaagcttccgcagttcaagggatctacggtgtcggtaccccattcgagtctcccgaa
gtgaaagaaatagctgcaatcctgaaagacaagcaatataatcagtatggcaatgaagtg
atgtataatggattttccggcatgaaactcacctcacaagtgtatattggaccaacgttt
tatcagcgcttgaagcatttggtggaaaataagatgtacgcccgtgcacgtggagccgtg
accgtgctgtgtagacaaccacaggaaggaagggcgagaggcggtgggttacgttttggt
gaaatggaacgggattgtttgataagccatggcgcggctctgaatctgcgggaacgattg
ttcgaagtgtcggatccgtatcgtgtgcatgtgtgtgataagtgtggattgattgctgtg
gctaatctgaccaacagaaccttcgaatgccgacgctgcgttcgaaaggttgatgtttcg
cagatcacgattccgtatgcctgcaaactgctcttccaggaactgatgtgtatgggaatc
tcaccgcgcattctgttttag
DBGET
integrated database retrieval system
