Paramacrobiotus metropolitanus: 129591611
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Entry
129591611 CDS
T09028
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03020
RNA polymerase
pmeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129591611
09124 Replication and repair
03420 Nucleotide excision repair
129591611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129591611
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129591611
Enzymes [BR:
pmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129591611
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129591611
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129591611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
129591611
NCBI-ProteinID:
XP_055343304
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MKKQSFSESEVICLSDSDDSSVIVLSESPSPKPDAVVPVLESLINGDSDKTVFGDENIPP
LYVTPPPSPSWRDDCCDEDHEKLALGSVSDDLAKFIAHDHSSFYERENDETTREGIPKAG
LSDYIDEDVYAALGSAGWEEAAWLIIQSFFDDKGLVQQQLDSFNKFVSTDLPEIVTSSLP
IVIRKNDESFGLKEPEPGDPICYRYTFEGVGISSPFREGRTSDSGVSVLHPLEVRLRDLT
YDCNLWVDIKETIQRHERADESDIIKQVYMGRLPIMVRSDYCQMHGQSDPVVISAMGECV
HDPGGYFIIDGSEKAVIAQERMAENHLNITRVTNSKYQYKAEIRSVPETGNKTASPLWVN
MLSKPLQCNSITVLSVGYPIVAIIPFVKQEIPIMILFRALGFETDQEIVQLISLNQEDNE
IHEWLKPSLMYAQAIQTQEHALNFIGNRSAKPAVVRSERIRFAKDILEKNVLPHVGTHAD
FSRRKAFFLGYMVDRLIRTAMGRCDCVDRDHYANKRLDLVGPLFATLFRQQFQKLRKEMT
LTLEKELQRKPNIKTGLNVALALKSRIITDGMRYALATGNWGEARRFQTNRVGVSQVLNR
LSYCATLSHLRRIRTPFPTASKMARPRQLHNTQWGIVCPSETPEGQLVGLIKNLSLMACV
SVGSDVVVVRDVLEACKVVPLLEIDPATAASILYPDESAHRKCGARIFVNGDFFGFHEDP
EEVVQLMRIARQKNDISFEVSITWDISARNIYIHTEPGRVYRPFLVVKSGSTKRILAITA
ADIIKLRQKEEPRCKFEHFVRAGAIEYIDVSEEETILCAMYPSDLNFASRNCTHCEIHPS
MILGVCASTIPFPEHNQSPRNTYQAGMAKQALGIYATNYASRYDNDCHVMYYPQKPIVST
KSERLILKNDKLPAGANCIVAIASYTGYNQEDSVILNTASLQRGLFRHTFYRTYEATEEK
KITGKHAEYIQVPPTQCEGMRDAMYSKLDRDGIIRPGTRVSGTDCIIGKVIEMRNTGDVA
KDETGIVQKDASIFIRTHETGIVDAAFRSTNDEGRPFCKVRIRSVRTPVMGDKFTSRHGQ
KGTVGFCYPVEDLPFTTQGIVPDIIVNPHAIPSRMTIGHLMETVFGKAACALGLPFGDAT
PFTKVETMRACIADLKAHKYHPHGNEVLFNGFTGAKLNSPVFIGCTYYIRLKHLVEDKMF
SRARGSMVLLTRQPHEGRARGGGLRIGEMERDCLISHGAALNLRERLFEVSDAYRVHICS
QCGFMAIAKLHTQHFHCSKCVRETTIFQVTLPYACKLLFQELMSMGILPRLLFTDSPGEN
SSNLNVNVHKVS
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaatcgttttccgaatcggaagttatttgtttatcggattctgatgattct
tctgtcatcgttttatccgaatccccatcgcccaagcctgatgcagtggttcctgtgctg
gagtcgttaataaatggcgacagtgataagaccgtttttggagatgagaatattcctccc
ctctacgtgacgccgcccccaagtccatcgtggagggatgattgctgtgatgaggaccac
gagaaattagcgctgggctccgtgtcggatgatttggccaaattcatcgcccatgaccat
agttctttctacgaaagagaaaacgatgaaactactcgagaagggatccccaaagcaggc
ctttccgattatatcgacgaggatgtgtacgctgcactcggcagtgccggttgggaagag
gctgcctggttgattatccagtcgttttttgacgacaaaggcctggtccagcagcagttg
gattcgttcaataaattcgtttccacggatcttccagaaattgtcaccagttcattaccg
attgttataagaaaaaacgatgaaagttttgggttgaaagaaccggagcccggagacccg
atatgttatcggtacaccttcgaaggggttggcatctcttccccgtttcgtgaaggccga
acgagcgattctggggtttcggtgctgcatcctctggaagtcagacttcgagatctcaca
tatgattgtaacttgtgggtggatatcaaagagacaatacagcggcatgaacgtgcggat
gaatcggacattattaagcaggtttacatgggacggttgcccatcatggtgcggtctgac
tactgtcaaatgcatggtcaaagtgacccggttgtgattagcgcgatgggtgaatgcgtc
cacgatcccggaggatatttcattatcgatggatccgaaaaggcagtgattgcccaagag
cgtatggctgaaaaccatttaaacatcactcgcgtaacgaattcgaagtatcagtacaaa
gctgaaatccgatccgttccggaaaccgggaacaagacagcaagtccgttgtgggttaac
atgctttcgaagccgctgcagtgtaattccataactgtgctgtcagtgggatatccgatt
gtggccatcataccctttgtcaagcaggaaattcctattatgatcctgtttcgagctctg
ggtttcgaaaccgatcaagaaattgtgcagctaatctccctgaaccaggaggataacgaa
attcacgaatggctgaagccgtcgctgatgtatgctcaagccattcagacgcaagaacac
gctttgaatttcattggaaatcggagcgcaaagccagccgtcgttaggtcagaaaggatt
agattcgccaaggacatactcgagaagaatgttttaccacacgttggcacacatgccgat
ttttcacgacggaaagcgttcttcttgggctacatggtcgaccggctgatccgtacggcc
atgggacggtgtgattgtgtcgaccgggaccattatgcgaacaagcgcctagacctcgtc
ggtccgctatttgccaccctctttcgtcagcagtttcaaaaactgcggaaggaaatgacg
ctgacgcttgagaaagagttgcagagaaagcctaatattaaaactggcctgaatgtcgca
ttagccctgaagagccggatcatcacggatggtatgcgctacgccctggccaccggcaac
tggggggaagcccgacgtttccagacgaatcgggttggcgtcagccaagtgctcaatcgg
ctgtcgtactgtgctactctgtcccatttgaggagaattcgaacaccgtttcccacagcg
tccaagatggcgcggccccggcagctgcacaatacacagtggggcattgtctgtccctcc
gagacaccggaaggtcagctggtgggattgatcaagaatttgagcctcatggcatgtgtg
agtgtcggatcggatgttgtggttgtgcgcgacgttctggaagcctgtaaagtggtaccg
ttgttagagattgatccggctacggcagctagtatattgtacccagatgaatcggctcac
cggaaatgcggtgcgcgtatttttgtgaacggagatttctttggtttccatgaggatccg
gaggaagttgtacagctgatgcgaatagcaaggcaaaaaaatgacatttctttcgaggtg
tccatcacgtgggatatatctgcgcgaaatatttacattcatacggaacctggcagggtt
tataggcccttcctcgtcgtaaaatccggcagcacaaagcgtatcttggctataacagct
gctgatatcattaaactgcgacaaaaggaagagccgcgttgcaagtttgagcattttgtt
cgagccggtgccatagaatacatcgatgtcagcgaagaggaaacgattctctgcgcgatg
tatcctagtgatttgaatttcgcgtcgcgaaattgcacgcactgcgagatccatccttcg
atgattttgggggtgtgtgcgtcgaccataccatttccggagcacaaccagtctccacgg
aacacctatcaagccggcatggccaagcaagccttgggtatctacgcgaccaattatgcc
agccgttacgacaatgattgccatgttatgtattatcctcagaagcctatcgtcagcacg
aagtccgaacggctgattctgaaaaacgacaagctgccagccggggcgaactgcatcgtg
gccattgcatcgtacaccggctacaatcaagaggattcggttatcttgaatacggcatcc
ttgcaaagaggcctttttcggcacacattttatcggacatacgaagccactgaggaaaag
aaaatcaccggtaaacatgcagagtacattcaggttccgcccactcagtgcgaaggtatg
cgggatgcaatgtacagcaaactggaccgtgatggcataatccgaccgggaacgagagtg
tctggaacggactgcattattggaaaggtcatcgaaatgcgaaataccggagacgtagca
aaagacgaaaccggaattgtacagaaggacgccagcatctttattcgtactcatgaaacg
ggaattgtggatgcagctttccgaagtacaaacgatgaaggacggccgttttgtaaagta
cgcatacgatctgtgcgtacaccggtgatgggtgataaattcaccagccgtcatggacaa
aagggcactgttggattttgttacccagtggaggatttgccctttactacgcagggcata
gttccggatatcatagtgaatcctcatgccataccttcgcgaatgaccattggtcactta
atggaaactgtctttggaaaggcggcgtgcgcgttggggctacctttcggagatgccacg
cccttcaccaaagtggaaaccatgcgggcatgcatcgcagacctaaaggctcacaagtac
cacccacatgggaacgaagtccttttcaacggttttacgggagccaagttaaattctcct
gtgtttattggctgcacatattacatccggctgaaacacctggtggaagacaagatgttt
tcgagagccaggggatcgatggttctgctgacccgtcaaccgcacgaaggacgtgcaagg
ggtggaggtttacgtataggagaaatggagagggactgtttgataagccatggagcggca
ttaaatttacgggaacggttatttgaagtatcggacgcgtatcgggtgcacatttgcagc
cagtgtggttttatggccattgccaaacttcacacgcaacatttccattgcagcaaatgc
gtgcgtgaaacaacgatatttcaagtgacgcttccttacgcatgtaaactattgttccag
gagctgatgtcgatgggtattttgcctagattactgtttaccgattcgccgggtgaaaat
agcagcaatctaaacgtgaacgtgcataaagtttcgtga
DBGET
integrated database retrieval system
