Paramacrobiotus metropolitanus: 129591678
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Entry
129591678 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: RNA helicase aquarius-like
KO
K12874
intron-binding protein aquarius
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129591678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmeo03041
]
129591678
Spliceosome [BR:
pmeo03041
]
Complex B
Other components
Prp19-related factors
129591678
Complex C
129591678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
AAA
nSTAND3
SLFN-g3_helicase
PhoH
AAA_25
RecA_N
AAA_16
ATPase
AAA_22
Parvo_NS1
DnaB_C
NB-ARC
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
129591678
NCBI-ProteinID:
XP_055343398
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MAARRMRRFRSAYPTVDQINSDVITKLAVDYWAPGDESVTHKPFDLDVVVGIYRELDAVR
FSSRRLMLLDFSQYLERFLWPNFSPRTSRCWQLVMSIVALINEKKRERAPVWHAFTAYPA
HFPEFFKQVLVLTSESNQEDQQKPALSLTEKCQLLIFLSHCVNSLEEDIVREQVQKIFGL
PIWFXLSAKRLEIELKKAPNLKKAWDRLVKKDLIKDDAAKSLDDLYRNFMRNLMQQFLTI
LNAIQPEGDLEPGCLGYCEHFLNLMIDCQSSLNTRRFFHALMDDAHILVKCKLSGLYRRS
EGRVFSQLIDALEFYSSYEITLSGNDVSEQERNTEHYNRVSALQRTVFKLFTDNDGGRKF
ATAPIYKVDTREALKAFLDPLGFEDLKRLGDYVGVLGTDSLDPSDKNTDALRKHILTEVL
IAYHERRVSQLQRVNAMPIYPTEDIIWDEALVPDEFTLTSNTMPLPKLHLQFLSLHDYLL
RNFQLFRLESAYEIRTDIEDAIARMKPWTNEVGGVVFGGWARMALPINRFEVFDVGKPNV
GCKQPSRVRATITVTLNVRHAIKDEWQGLRKHDICFLLTVKPPNKNVGSPADGTASFLDY
SGLMYVRGCEIEGMLDDKGNLIDEMSEHKPVFHGETRQFRVWLDANQYYLDSQSASGTDI
YRGFNIIMRRKPEENNFKAVLETIRTLINSEWVVPDWLHDILLGYGDPASAHWTKLSNKD
VTLDFNDTFLSLEHVKACFLDEVVEFSDPRGLPMQPPFRITFAMPETSENGTKRDVDGEI
ITLPKRLTVEPYVKKSTSPYPRIEPKRNAIPFTPAQTQAIISGMQHGLTLIVGPPGTGKT
DVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMDLDIDERHLLRLGHGEEALETKK
DFSRYGRVNYVLAKRLELLSEVGRLQTSLGVPGDVAYTCETAGHFYLYQVLPRWQIYKNK
IKSAGSEASAMSVVSDSFPFSNFFGDAPQPLFKNDTFDDDMETAEVCFRYVENIFTQLEE
FRPFELLRSGLDRTRYLLTKEAKIIAMTCTHAGMKRQELVDLGFKYDNILMEEAAQILEV
ETFIPLLLQKPEHGYNRLKRWIMIGDHNQLPPIVQNKVFEKFCNMEQSLFTRFVRLGVPT
VDLDAQGRMRPSLCRLFSWRYKRLGNLPHTLRMPAFLTANTGFAFDYQLINVEDYNGVGE
SEPSAHFIQNLAEAEYVVATFMYMRLLGYPASSITILAAYNGQKHLIRDVIEKRCGTNPL
VGWPHKIATVDKYQGQQNDYVLLSLVRTKTVGYLRDVRRVVVALSRARLGLYVFARIPLF
RNCFELSPAMAVLMERPSQLHLFPTERFPVERKMLADPTDSPAVIIKTMPEMLKFVYDLY
AEKVQSLRPVYEAQMAAQADSSDSEPEEETAPTTEEPQQPAEETAVKAGPTKINFLPVED
MPFFPIRGDKGVTVEEEDDGDKDD
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacgcagaatgcgccgatttcgttcggcttatcccactgttgaccagataaat
tctgatgttattacaaagctggcggtggattattgggcaccgggcgatgaatccgttacc
cacaaacccttcgatcttgatgtggtagttggcatctatcgagagctggacgccgttagg
ttttccagtcggcgcctgatgctcttagacttcagtcaatatttggagagatttttgtgg
ccaaatttttctccacggacatcaagatgctggcaacttgtcatgagtattgttgcactc
attaacgaaaaaaagcgcgagcgagcacctgtatggcatgcgttcacggcatatccagcg
cattttccggaattttttaaacaagttctggtccttacctccgaaagcaaccaagaagat
cagcagaagccggcgttatccctgactgaaaagtgccaactgttgattttcctgtcacat
tgtgttaacagtttggaagaggacatcgtgcgagaacaagttcaaaaaatcttcggctta
ccgatttggtttntcctttctgccaaacgtctggaaatcgaattgaaaaaagctcctaat
ctgaaaaaggcttgggatcgcctagtaaagaaggatcttattaaagacgatgccgccaaa
tctctggatgatttgtacaggaatttcatgcggaatcttatgcagcagtttttgacgatt
ttaaacgcaatacaacccgaaggggatttggagccgggatgcctgggttattgcgagcac
ttcttgaacttgatgatcgattgtcagtcatcgctgaatacccggcgattttttcacgct
ctaatggatgatgctcatattctcgttaaatgcaaactgtccggtttgtatcgtcgatcc
gaaggaagggtgttttcgcagctaattgatgctctggaattttattcaagctatgaaatc
actctcagcggaaatgatgtgtcggagcaagaacgtaataccgaacactacaaccgtgtc
tccgccttacagcggacagtgttcaaattgttcaccgataacgacggtggtcgcaagttt
gcgacggctcctatctataaagtcgatacgcgggaagcgctaaaggcatttctggatccc
cttggcttcgaggatcttaaacgactgggtgattacgttggggttttgggtacggattca
ctggatccgtctgacaagaacacagacgccttgaggaagcacattctgacggaagtcctt
atcgcataccatgagcgtcgcgtttcacaactgcagcgggttaatgcaatgccgatttat
cctacagaagatattatctgggatgaagcgctcgtcccggatgaattcacgttaacatca
aacacgatgccgcttcctaaactacacttacaattcctttccttgcacgattatttactg
cggaacttccagctgtttcgtctggagtcagcctatgaaatacgcacagatatcgaagac
gcgatagcgcgtatgaagccttggacaaatgaagtcgggggtgtcgtttttggtggatgg
gcgcgcatggctctgcccatcaaccggtttgaggtctttgacgttggcaagcctaatgtt
ggatgcaagcagccctcacgagttcgggccacgatcaccgtgacgcttaatgtccggcat
gcaatcaaagatgaatggcaaggcttgagaaagcatgacatttgcttccttttgactgtc
aaaccacctaacaaaaatgttggatctcctgccgatggaacggcttcctttttggactac
agcggcttaatgtacgtgagaggatgtgaaatcgaggggatgctcgatgataaaggaaac
ctgattgatgaaatgtccgaacataaacctgtctttcatggagaaaccagacagttccgc
gtatggctggatgctaaccagtattatttggattcccagagtgcttctggcacggatata
tatcgcggttttaatattattatgcggcgcaaaccggaagagaacaatttcaaagcggta
ctggaaacgattcgaacgttgattaattccgaatgggtggtgcccgattggctgcacgac
atcctgcttggttatggggatcccgcatcagcccattggactaaactatccaacaaagac
gtgacgctggatttcaacgataccttccttagcttggaacatgtgaaggcatgttttctg
gatgaagtcgtggaatttagtgatcccagaggcttgccaatgcaaccaccgtttaggata
acatttgctatgccggaaacctctgagaacggcacgaaacgcgatgtggatggggaaatt
attactttgccgaaacgattgaccgtggaaccctacgtgaagaaatccacttctccatat
cctcgaattgaaccgaaaaggaatgccatacctttcaccccggctcagacccaagccatc
atttccggcatgcagcacggtctgacattgattgtcggtccacccggaaccggtaaaacc
gacgtggctgtgcagataatttccaatatttatcacaattttccggagcagcgaacgctg
attgtgacgcattccaaccaagcactgaatcagctctttgagaaaattatggatttggat
attgatgagcgccatctgttacgtctgggtcacggtgaggaagccctggagaccaagaaa
gacttcagtcggtatggacgagtgaactatgtccttgcgaagcgactagagttgctcagt
gaagtcggtcggctgcaaacaagtttaggagtccccggggatgttgcgtatacctgtgaa
acagcaggacatttttatttataccaggtgcttcccagatggcagatctataaaaataaa
atcaaaagcgccggaagcgaagcatccgccatgtccgtggtgtcggattcgtttccgttt
tcgaatttcttcggcgatgctccgcagcctttattcaaaaatgacacgtttgacgatgac
atggaaacggctgaagtgtgtttccgttacgttgagaatatctttactcagctggaagaa
tttcggccgtttgaactgcttcgcagtggattggatcggactcggtatctgctgaccaaa
gaggccaagatcattgccatgacttgtacacatgctgggatgaagcgacaggaactggtg
gatctcggatttaaatatgacaacattcttatggaagaagctgcacaaatcttggaagtg
gagacctttattccactactgctgcaaaagccagaacatggatataaccggttgaaaaga
tggattatgatcggggatcacaatcagctaccacccattgtgcagaataaggtgtttgag
aaattctgcaacatggaacagtcactgttcacccgattcgtacgccttggcgttcctacg
gtagatctggatgcgcaaggccgtatgagaccaagtttatgtcgcctgttcagctggcgg
tataagcgcctcggaaaccttccgcacacattgcgaatgccggcttttctcaccgctaat
accggcttcgcgtttgattaccagctgatcaatgtggaagattacaatggtgtgggagaa
tccgaaccaagcgcccatttcatacagaatctggcagaagcggaatacgtcgtggccact
tttatgtacatgcgcctcttgggatatcctgcgtcctcaataacaattctggcggcttac
aacggacagaaacatcttatccgggatgtaattgaaaaacgatgcggtactaatccattg
gtgggctggccacataaaatcgctacagttgataagtatcaaggtcaacagaatgattat
gtcctcctgtccctggtacgcacaaagacagtcggttatctgagggatgtacgacgtgtt
gttgtcgcgctatcccgtgctcgattggggttgtatgtttttgcccggattccgctgttc
cgaaactgttttgagctgagtccagcaatggctgtacttatggaacgaccgtcacaattg
catctgttccctactgaacgctttccagtggaaagaaagatgctggctgatccaaccgat
agtccggccgtaattatcaaaaccatgccggaaatgctgaaatttgtgtatgatttatac
gcggaaaaggtgcaatcgttgcgaccagtttacgaagcacagatggctgcgcaggccgac
agtagcgattccgaaccggaagaggagacggcgcccaccacagaggagccacaacagccg
gcggaagaaactgccgtcaaagccggtccgaccaaaatcaacttcctccctgtggaagac
atgcctttcttcccgatccgtggcgacaaaggtgtgacggttgaggaggaagacgacggc
gacaaggatgactaa
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integrated database retrieval system
