Paramacrobiotus metropolitanus: 129591837
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Entry
129591837 CDS
T09028
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129591837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmeo03041
]
129591837
Spliceosome [BR:
pmeo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129591837
Complex C
U5 SnRNP specific factors
129591837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
129591837
NCBI-ProteinID:
XP_055343640
LinkDB
All DBs
Position
Unknown
AA seq
2390 aa
AA seq
DB search
MDPARFGPPPGFPGAPPGFPGGPPPPRMPFPFPPPHTAPPFLPPSGMGLPPVPPQGPPPP
AALQSLHPPGAPFPPQPDERQRQAELEEKAKKWQLLQTKRYAEKRKFGFIDAQKEDMPPE
HVRKIIRDHGDMTHKKFKNDKRVYLGALKYIPHAVLKLLENMPMPWEQVREVKVLYHITG
AITFVNEIPWVVEPVYVAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLD
VEPLEAIRMDLDNNEDRAVSHWFYDNKPLVDTPHINGTTYRRWTLDLPKLATLYRLANQL
LSDLVDDNYFYLFDLKSFFTAKALNMAIPGGPKFEPLVKDVNPADEDWNEFNDINKIIIR
QPVRTEYRIAFPFLYNNLPHHVHLSWYHTPNVVFIKTEDPDLPAFYFDPLINPVTSSKTG
AARSSEVALDDLEEFELPEMVQPLLQEAPLYTDNTANGIGLLWAPRPFNMRSAMTRRAID
VPLVKNWYREHCPTGMPVKVRVSYQKLLKTYVLNALKHRPPKPQKKRYLFRSFKSTKFFQ
STSLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNA
FHLCREILRLTKLVVDAHVQYRLNNVDAFQLADGLQYIFSHIGQLTGMYRYKYKLMRQIR
MCKDFKHLVYYRFNTGPVGKGPGCGFWAPAWRVWLFFLRGVTPLLERWLGNLLSRQFEGR
HSKGVAKTVTKQRVESHFDLELRASVMHDILDMMPEGIRQNKARTILQHLSEAWRCWKAN
IPWKVPGLPTPVENMILRYVKLKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRMTRLY
LKAEQERQHNYLKDGPYVSAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILAL
ERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYS
HLVPVHDIEPLEKITDAYLDQYLWYEADKRGLFPPWIKPSDAEPPPLLVYKWCQGINNLQ
DIWDSTDGQCVVMMQSQFEKMYEKMDLTLLNRLLRLIVDHNIADYMTAKNNVLINYKDMT
HTNGYGIIRGLQFSSFVTQYYGLVLDLLVLGLHRASEIAGPPQMPNDFLTFQDVATETSH
PIRLYCRYIDKIFVLFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLM
KHDVNLGRAVFWDIKNRLPRSTTTINWDESFVSVYSKDNPNLLFSLCGFECRILPKCRTS
TEEYTHKDGVWNLQNEVTKERTAQCFLRVDDDSMQKFHNRVRQILMASGSTTFTKIVNKW
NTALIGLMTYYREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKEIG
GLGMLSMGHVLIPQSDLRWSKQTDIGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQ
RVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFK
QYQILKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFW
EKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMH
GKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEVETVQKETIHPRKSYKMN
SSCADILLFAAYKWNVSRPSLLADVKDMMDSTTTQKYWIDVQLRWGDFDSHDVERYARAK
FLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQALAKIMKANPALYVL
RERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPL
NGALICFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV
TRKGMLDPLEVHLLDFPNIVIKGSELQLPFQSVLKVEKLGDLVLKATEPQMVLFNLYDDW
LKNISSYTAFSRLVLILRALHVNTERTKVVLKPDKTTITEPHHIWPTLTDEEWIKVEVAL
KDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTREQSNLTAVA
TKTTTKSGDAIVTTTTSNYETQWFSSRTEWRVRAISATNLHLRTQHIYVSSDDIKETGFT
YVLPKNLLKKFIVVSDLRTQIAGYLYGVSPADNMQVKEIRCIVVPPQRGSHQAVEMPEML
PQHDFLKEMEPLGWIHTQPNELPQLSPQDVTTQAKIMAEHPAWDGERCIVMTCSFTPGSC
SLAAYKLTPSGYEWGRQNADKGNNPKGYLPSHYEKVQMLLSDRFLGFFMLPVAGSWNYNV
GRPQFDSKMKYELQLANPKEFYHEDHRPTHFRNFTQIEEAAAVDHDDSFA
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgcgcgtttcgggcctcctccggggttccccggtgcacccccgggtttcccg
ggcggccccccgcccccgcgcatgcccttccccttcccgccgccccacaccgcgccgccc
ttcctcccgccctcggggatgggactgccccccgtccccccgcaagggccgcccccgccc
gccgctctccagagtctccatccgccgggggcgcctttcccgccgcagcccgatgagcgg
cagcggcaggcggagctggaggagaaggccaagaagtggcagctgctgcagacgaagcgc
tacgcggagaagcgcaaattcggcttcatcgacgcgcagaaggaggacatgccgccggag
catgtgcgcaagatcatccgcgaccacggcgacatgacgcacaagaagttcaagaacgac
aagcgcgtctacttgggcgccttgaagtacattccgcacgcggtgctgaagctgctggag
aacatgcccatgccgtgggagcaggtccgcgaagtcaaggtcctctatcacatcacaggt
gcgatcacgttcgtgaacgagatcccgtgggtggtggagccggtgtacgtggcgcaatgg
ggcaccatgtggatcatgatgcggcgcgagaagcgcgaccggcgccacttcaagcgcatg
cgcttcccgcccttcgacgacgaggagccgccgctggactacgccgacaacgtgctggac
gtggagccgctggaggccatccgcatggacctggacaacaacgaggaccgcgccgtcagc
cactggttctacgacaacaaaccgctagtggacacgccgcacatcaacggcaccacctac
cgccgctggacgctggacctgcccaagctggccacgctctaccggctggctaatcagctg
ctgtccgacctggtcgacgacaactacttctacttgttcgatctcaagtccttcttcacc
gccaaggcactcaacatggccatcccaggtggtccgaagtttgagccgctggtgaaggac
gtgaacccggcggacgaggactggaacgagttcaacgacatcaacaagatcatcatccgg
cagccggtgcgcaccgagtaccgcatcgccttccccttcctgtacaacaacctgccgcac
cacgtccacctctcctggtaccacacgcccaacgtggtcttcatcaagaccgaggacccc
gacctgccggccttctacttcgacccgctgatcaaccccgtcactagcagcaagacgggc
gcggcgcgctcctcggaggtggcgctggacgacctggaggagttcgagctgcccgagatg
gtccagccgctgctgcaggaggccccactgtacacggataacacggccaacggcatcggc
ttactgtgggcgccgcggcccttcaacatgcgctcggccatgacgcgccgcgccatcgac
gtgccgctggtcaagaactggtaccgcgaacactgtcctaccggaatgccggtgaaggtg
cgcgtgtcgtaccagaaactgctgaagacctacgtgctcaacgcgttgaagcaccggccg
ccgaaaccgcagaagaagcgctacctgttccgctccttcaagtccaccaaattcttccag
tccacctcgctggactgggtggaagccggtctgcaagtgtgtcgccaaggctacaacatg
ctgaacctgctgatccaccgcaagaacctcaactacctccacctcgactacaacttcaac
ctcaagcccgtcaagacgctgaccacgaaggagcgcaagaagtcccgcttcggcaacgcc
ttccatctgtgccgcgagatcctgcggctgacgaagctggtggtggacgcgcacgtccag
taccggctgaacaacgtggacgccttccagctggcggacgggctgcagtacatcttctcg
cacatcgggcagttgacggggatgtaccgctacaagtacaaactgatgcggcagatccgc
atgtgcaaggacttcaagcatctggtgtattaccgcttcaacaccggtccggtgggaaaa
ggccctggatgcgggttctgggcgccggcgtggcgggtgtggttgtttttcctgcgggga
gtgacaccactgttggagcgctggttagggaatctgttatcgcggcagtttgagggccgg
cactcgaagggcgtggccaagacggtgacgaagcagcgcgtagagagccacttcgatctg
gagctgcgggcatccgtcatgcacgacatcctggacatgatgccggaggggatccgccag
aacaaggcccgcacgattctccagcatctcagcgaggcgtggcgctgctggaaggccaat
attccctggaaggtgcccggactgccgacgccggtggagaacatgatcctgcgctacgtc
aagctgaaggcggactggtggacgaacacggcgcactacaaccgcgagcggattcgccgc
ggggccaccgtggacaagacggtgtgcaagaagaatctgggccggatgacgcggctgtat
ttgaaggcggaacaggagcgccagcataattacttgaaggacgggccgtatgtcagcgcg
gaggaggccgtggcgatttacacgactaccgtgcactggttggaaagccggcgattttcg
ccgattccgtttccgccgctgtcgtacaagcacgacacgaagctgctgattctagccttg
gaacggctgaaggaagcgtacagtgtcaagtcccggctgaaccagagtcagcgcgaggaa
ctgggcttgattgagcaggcgtacgacaatccgcacgaagcgctgtcccgcatcaagcgc
cacctgctgacgcagcgcgccttcaaggaggtcggcatcgaattcatggatctgtacagc
catttggtgccggtgcacgatatcgagccgctggagaagatcaccgacgcctatctggat
cagtatctttggtatgaagcggacaagcgcgggctgttcccgccgtggatcaagccgtcg
gacgcggagccgccgcctttgttggtgtacaagtggtgccagggcatcaacaacctgcag
gacatctgggacagcacggacgggcagtgcgtggtgatgatgcagtcgcagttcgagaag
atgtacgagaagatggacctgacgctgctcaaccggctgctgcgcctcatcgtcgaccac
aacatcgccgactacatgacggccaagaacaacgtcctcatcaactacaaggacatgacg
cacaccaacggctacggcatcatccgcggcctgcagttctccagcttcgtcacgcagtac
tacgggctggtgctggacctcctcgtcctggggctgcaccgcgccagcgagatcgccggt
ccgccgcagatgcccaacgacttcctcaccttccaggatgtggccacagagacctcccac
ccgatccgtctgtactgccgctacatcgacaagatcttcgtcctcttccgcttctcggcg
gacgaagcgcgcgacctgatccagcgctacttaacggagcaccccgatcccaacaacgag
aacatcgtgggctacaacaacaagaagtgctggccgcgcgactcgcgcatgcgcctcatg
aagcacgacgtcaacctgggccgcgccgtcttctgggacatcaagaaccggctgccgcgc
tccaccaccaccatcaactgggacgagagcttcgtgtcggtgtactccaaggataatcct
aacctgctcttcagtttgtgcggcttcgagtgccgcatcctgcccaagtgccgcaccagc
accgaggagtacacgcacaaggacggcgtgtggaatctgcagaacgaagtgacgaaggag
cggacggcgcagtgcttcctgcgcgtcgacgatgactccatgcagaagttccacaaccgc
gtcagacagatcctgatggcctcgggctcgacgaccttcaccaagattgtcaacaagtgg
aacacggcgctcatcggactgatgacgtattaccgcgaggcggtggtgaacacgcaggag
ctgttggatctgctggtgaagtgcgagaacaaaatccagacgcgcatcaagatcgggctg
aactcgaagatgccgtcgcgcttcccgcccgtggtgttctacacgccgaaggagatcggc
ggcctgggcatgctgtcgatggggcacgtgctgatcccgcaatcggatctgcgctggtct
aagcagacggacatcggcatcacgcacttccgctcgggcatgtcgcacgacgaggaccag
ctgatccccaacttgtaccgctacatccagccctgggagtccgagttcatcgactcgcag
cgcgtctgggccgagtacgcgctcaagcggcaggaggccaacgcgcagaaccgccgcctg
acgctggaggatctggaggacagttgggatcgcgggattccgcggatcaacacgttgttc
cagaaggatcgccatacgctggcctacgataagggctggcgtgtgcgcacggagttcaag
cagtaccagatcctgaagcagaaccccttctggtggacgcaccagcggcacgacgggaag
ctgtggaatttgaataattaccggacggacatgatccaggcgctgggcggcgtggagggc
atcctggagcacacgctgttcaagggcacgtacttccccacgtgggagggcctgttctgg
gagaaggccagcgggttcgaggagtcgatgaagtacaagaagctgacgaacgcgcagcgc
tcgggcctcaaccagatccccaaccggcgcttcacgctctggtggtcgcccaccatcaac
cgcgccaacgtctacgtcggcttccaggtgcagctggacctcaccggcatcttcatgcac
ggcaagatccccacattgaagatctccctcatccagatcttccgcgcccatctctggcag
aagatccacgagtccgtcgtcatggatttgtgtcaggtgtttgatcaagagctggacgcc
ctggaagtcgagacggtgcagaaggagacgatccatccgcgcaagagctacaagatgaac
agctcctgcgccgacatcctgctcttcgccgcctacaagtggaacgtgtcgcgaccgagc
ctgctggccgacgtgaaggacatgatggacagcaccaccacgcaaaagtactggatcgat
gtgcagctgcgctggggcgacttcgactcgcacgacgtggaacgctacgcgcgcgccaaa
ttcctggactacacgacggacaacatgtccatctacccgtcgcccacgggcgtgctgatc
gccatcgatttagcctacaacctgcacagcgcctacggtaactggttcccgggctcgaag
ccgctgatccagcaggccctggccaagatcatgaaggccaacccggcgctgtacgtgctg
cgcgagcgcatccgcaagggcctgcagctgtacagctccgagcccaccgagccctacctg
tcctcgcagaactacggcgagctcttctccaaccagatcatctggttcgtcgacgacacc
aacgtctaccgcgtcaccatccacaagaccttcgagggcaacctcaccaccaagcccctc
aacggcgccctcatctgcttcaatccccgcactggccagctattcctcaaggtgatccac
acgtcggtgtgggccgggcagaagcgtctgggtcagctggccaagtggaagacggcggag
gaagtggcggcgctgatccgctcgctgccggtggaggagcagcccaagcagatcatcgtg
acgcgcaagggcatgctggacccgttggaggtgcatctcctcgacttccccaacatcgtc
atcaagggcagcgagctgcagctgcccttccagtcggtgctgaaggtggagaagctgggc
gacctggtgctgaaggccaccgagccgcagatggtcttgttcaacttgtacgacgactgg
ctcaagaacatctcctcctacaccgccttctcgcgcttagtgctcattctgcgcgcgctg
cacgtcaacaccgagcggaccaaggtggtgctgaagcccgacaagaccaccatcaccgag
ccgcaccacatctggcccacgctcaccgacgaagaatggatcaaggtggaagtggcgttg
aaggacctgattttagcggattacgggaagaagaacaacgtgaacgtggcctcgctgacc
cagtcggagatccgcgacatcatcctgggcatggagatctcggcgccctcggcgcagcgc
cagcagatcgccgagatcgagaagcagacgcgcgagcagtccaacctgacggccgtggcc
acgaagaccaccacgaagtcgggcgacgccatcgtgacgacgacgacgtccaactacgag
acgcagtggttctcctcgcgcaccgagtggcgcgtgcgcgccatctccgccaccaacctg
cacctgcgcacgcagcacatctacgtctcctccgacgacatcaaggagaccggcttcacc
tacgtcctgcccaagaacctgttgaagaagtttatcgtggtcagcgatctgcgcacgcag
atcgccggctatttatatggagtgagtccggcggataatatgcaggtgaaggagattcgc
tgcatcgtcgtcccgccgcagcgcggcagtcaccaggcggtggagatgccggagatgctg
ccgcagcacgatttcttgaaggagatggaaccgctgggatggatccacacgcagcccaac
gaactgccgcaactgtcgccccaggacgtgacgacgcaagccaagatcatggcggaacac
ccggcgtgggacggggagcggtgcatcgtgatgacgtgcagcttcacgccgggctcgtgc
tcgttggcggcgtacaagctgacgccgtcgggctacgagtggggccggcagaacgccgat
aaaggcaacaatcccaagggctatttgccgtcgcactacgagaaggtgcagatgctgctg
tcggaccgcttcctcggattcttcatgctgcccgtcgccggctcctggaactacaacgtc
ggtcggccgcagttcgacagtaagatgaagtacgagctgcagctggccaaccccaaggag
ttctaccacgaggaccaccgtcccacgcacttccgcaacttcacgcagatcgaggaggcc
gccgccgtcgaccacgacgactccttcgcctga
DBGET
integrated database retrieval system
