KEGG   Paramacrobiotus metropolitanus: 129592220
Entry
129592220         CDS       T09028                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
pmeo  Paramacrobiotus metropolitanus
Pathway
pmeo03013  Nucleocytoplasmic transport
pmeo04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pmeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129592220
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    129592220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmeo03019]
    129592220
   04131 Membrane trafficking [BR:pmeo04131]
    129592220
Messenger RNA biogenesis [BR:pmeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129592220
Membrane trafficking [BR:pmeo04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    129592220
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_TEP1_C Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Nucleoporin_N Beta-prop_WDR35_TULP_N DprA_N NBCH_WD40
Other DBs
NCBI-GeneID: 129592220
NCBI-ProteinID: XP_055344170
LinkDB
Position
Unknown
AA seq 400 aa
MSIAMPVQAEHKDLIHDVALDYYGRRMATCSSDQSVKIWDLQDDNTWKITANWKTHAGSV
WKVTWAHPLYGQLIATCSFDRTAALWEETVGDGSSVAQSHWVKKATFVDSRGSVTDVQFA
PKHLGLQIATTSSDGTIRIYENIDQSNLSQWQTLHEFSSKFSSTSCIAWSQSRLLPVILA
VGTDDESPTANSDRTPGKVLLFELIDNGRRYGKVETLNQISEPVNDLTFANTLGRSFHVL
AVASRDLFIINISQSSSKRSNSVSSVNSTHQVSSQPKIYDISLRGLFKNHQSRVWRVSWN
ITGTILASSGDDGCIRLWRADHVGVWNCMTVIRGDGSLANAEDTLPGRVSRKPSIPDGPA
GSLPPLAVSATAHNMNNWLNSSNGQLGGSPTISRWHGPKL
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgagcattgcaatgcccgtccaggctgagcacaaagatctcattcatgatgtggctttg
gattattatggccgtcggatggccacttgctccagcgatcagagcgtcaagatctgggat
cttcaagatgataatacatggaaaataactgcgaattggaagacgcacgcgggatcggtg
tggaaagtgacatgggcccatccactgtacggtcagttgatcgccacgtgctcctttgat
cgcaccgcggcgctgtgggaagaaacggtgggtgatggaagctccgttgcgcagagccac
tgggtgaagaaagccacttttgtggatagtcgcggctccgtgacggatgtgcagtttgcg
ccaaaacacttgggtctccagatcgcgacgacatcgtcggacgggacgatccggatctac
gagaatattgaccagtcgaatttgtcccagtggcagacactgcatgaattctcatccaaa
ttctcctcgacgagttgcattgcctggagtcagtcgcgtttgttgccggtgatcctggcg
gtcggcaccgacgacgaaagtcccacggctaacagtgatcggacgcccgggaaggtgcta
ttattcgagctgatcgataatggaaggcggtatggcaaggtggaaacgctgaaccaaatc
agtgaacccgtgaatgatttgacgtttgccaatacgttgggccggtcatttcacgtgctg
gctgtggcctccagggatcttttcatcatcaatatttcgcaatcatcctccaaacgttcc
aattcggtgtccagcgtgaattccacgcaccaggtgagcagtcagccgaaaatctacgac
atcagtttgcgcggactcttcaaaaaccatcagtcgagagtgtggcgtgtcagctggaat
atcaccggaacgattctggcctcttcgggggatgatggatgtattcgtctgtggcgcgct
gatcatgtgggcgtgtggaactgcatgacggtgatccgcggggacggatccctggccaac
gccgaagacacgctgccgggccgtgtcagccgtaagccgtccattcccgacggaccggcc
gggtccctcccgccgttggccgtctccgccacggcccacaacatgaacaactggctgaac
agcagtaacggccagctgggcggcagtcccaccatctcccgttggcatggtcctaagttg
tga

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