Paramacrobiotus metropolitanus: 129592735
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Entry
129592735 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129592735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmeo03041
]
129592735
Spliceosome [BR:
pmeo03041
]
Complex A
U1 snRNP components
U1 related factors
129592735
Complex B
129592735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
129592735
NCBI-ProteinID:
XP_055344820
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MSITEENFDRIMVLDRIRQLASDRRNAASAWQEYPAPTGDTFYYYNAETSTTTWEKPTEL
KTPAEIILSDTPWKEYKTPEGSVYYHNKNTSETRWDCPELITKLKNVLEEYARIAAASGD
DVPVKIENDLDGLFSSRAGSETRSEDEKPAGASAEISRTSSPAVVSSAKPALAILPELEE
EKDDERVFDVFAVGDINTVDKRDAAEAFRKFLEEKNIPSNINWENCVKLIQSDKRFEVWK
KWSDRKQTFNQYKVLRQKQEREDQRKRVERAREAFEKMLSTTDRVSYSTPYRDAEKTFAN
DKIWRAVPERDREALYEDVMATVEKREKEQAERDRVEAMEKLAIILDNIPRIRYKTTWYE
CQKLLADSEAFVGDPVVKKINKLDALTVFKDHIIKLEKEQDEEQKAEKRQRKRVHRKNRE
AYMVLLDELAQKGIVHSMSKWKSVFPVIRNDSRFVNMQLPDDVRITEQFGSNALDLFKLY
VLDLKNRYNSDLEKILAVLKRSDFTVTPTTDFSDYFRIIHKDDSCMHIDRGNIRAAFDSL
KDAAIRNDKNRQDEIRRQEEREVQQKKSLRDNFINMLRDAKLSVNQDTKWTTIQDKFSSK
SAYQAIKSEEERIELFHEFKNKILNGDDGEAKKKKSKHDKQDKADVEDSVEEEKKEKKRH
HRSPSPDERESRKKRHRKSPVPENEDSDREIERRRRERREKERRADRKEERKDKVVEKAE
KLANELSEAELEKQRKLLMKQLGLMEE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaccgaagagaattttgaccgcattatggttcttgatcgtattcgccagttg
gcttctgatcgtagaaacgctgcatccgcatggcaggagtatcccgcaccgacaggcgat
acattctactattataatgccgaaacatcaacgacaacttgggagaagcccaccgagttg
aaaaccccggcggagataattttatccgatacaccgtggaaagagtacaaaaccccggaa
ggctccgtgtattatcacaataaaaatactagtgaaacccgctgggattgtccggagctc
attaccaaattgaaaaatgtcctggaggagtatgcgcgtattgcggccgcatccggcgat
gatgtgcccgtgaagatcgaaaatgatctcgacggcctgttctccagccgtgcgggctcc
gaaacgcgatccgaagatgagaaacccgcgggggcctcggccgagatctcccgcacctcg
tcgccggcggtggtatcatctgccaagccagcactggccattctgccggagttggaggag
gagaaagatgatgagcgggtgtttgatgtattcgccgtgggtgatattaataccgtggat
aaacgtgatgcggcggaggcctttcgcaagttcctggaggagaagaatattccttccaat
atcaactgggaaaattgtgtgaagctgatacagtcggataagcggtttgaagtgtggaaa
aaatggtcagatcggaagcagacgtttaatcagtacaaagttttacgacagaaacaagaa
cgggaagaccagagaaagcgtgtcgaacgcgctcgtgaagcctttgagaagatgctctcc
accaccgaccgtgtctcctactccacgccgtaccgcgacgccgaaaagacctttgccaac
gataaaatctggcgcgccgttccggaacgtgaccgcgaagccctgtacgaggatgtgatg
gccacggtggagaaacgagagaaagaacaggctgagcgcgaccgggtggaagccatggaa
aaactggccattatcttggacaatattcctcgcatccgctataaaacgacgtggtacgag
tgccagaagctcttggcggattccgaagcctttgtcggtgatccggtggtaaagaagatc
aacaaactcgatgcgttgacggtttttaaggaccacattatcaagctggagaaagaacag
gatgaggagcagaaagcggaaaaacgccaaaggaagcgtgttcacaggaaaaatcgcgaa
gcgtatatggtgttgctggatgagctggcgcagaaggggattgtgcattccatgtccaag
tggaagagtgtgttcccggttatcaggaatgattctcgatttgtgaatatgcagcttccc
gatgatgttcgtattacggagcagtttggctctaatgccttggatctctttaaattatac
gtattagacttgaagaatcgctacaattccgacttggagaaaatcctggctgtgctgaaa
cgtagcgatttcaccgtcaccccgacgacagatttctcggattattttcgcatcatccac
aaggacgactcctgcatgcacattgatcgcggcaacatccgggcagcgtttgactcgctg
aaggacgcagctatccgcaacgacaagaaccgacaggatgaaatccgccggcaggaagag
cgtgaagtccagcagaagaaatctctccgcgacaacttcatcaatatgctccgcgacgcc
aaactatcagtgaaccaggatacaaaatggaccaccatccaggataaattctccagtaaa
tccgcgtaccaagccatcaaatccgaagaggaacggattgagctgttccatgaattcaag
aataaaatcctcaatggtgatgacggcgaagcaaagaagaaaaagagtaagcatgacaag
caggataaagcggatgtggaggattcggtcgaagaagaaaaaaaggagaagaaacgccat
catcgttctccctcgccggatgaacgggaaagtcgcaagaaacgccaccggaaatccccg
gttccggagaatgaggatagtgatcgggagattgagcggcggcgacgagaacgccgcgaa
aaggagcggcgggccgatcgtaaggaggagaggaaggataaggtggtggagaaggcggag
aagttggctaacgagctgtcggaggccgagttggagaaacagcggaagttgctgatgaag
caactgggtttgatggaggagtag
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