Paramacrobiotus metropolitanus: 129593614
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Entry
129593614 CDS
T09028
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03420
Nucleotide excision repair
pmeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129593614
09124 Replication and repair
03420 Nucleotide excision repair
129593614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmeo04121
]
129593614
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129593614
Ubiquitin system [BR:
pmeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
129593614
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
129593614
TCR (transcription coupled repair) factors
Cul4-CSA complex
129593614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_LRRK2
TMEM131_like_N
Motif
Other DBs
NCBI-GeneID:
129593614
NCBI-ProteinID:
XP_055345998
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MAEPTRPRFYVASSEPAGAVTSCACGNFFRPTERNLAVAKKDQLDIMGFASEGVKIIATT
RTSSAISRILTIHPSWAKNDLLFVLMINYDVLMLELGTDGTHRPYIRTVAAGSVQDKVGR
VTEQSNQVAVDPENRCIALHIYDSLVRIIPLKDTAEPKEIESFNMRVEECNIGSIVFLHN
AARPTLALLHKDLYGTHISSYEVDFQEKELKPPKNKHVELKNLENDTISLCSVPGTNQGV
IACGFNTLTFADVDGVGITAGVKKENRGLGIAYALLHDSPTGTKFLVGDLSGALHVIFLK
KTPSEKSGHAQVVECGVISLGVLTITSCLAYLDNRVVFVGSRLSDSMIIRLRDDPNPETG
NLFDVAETISNIGSITDFSLVRSDNQGTQPQMIVCSGMGPGSHARIVRSGIGMQETTSLD
APTGRQIFALNSQSAAFGPHDWLVASFLSETKVLRMENEVGEFEDLIDVGAFVLNDSTQL
AAKVNGLIVQVTKKSIRIIVPGELTLKEEWFPSDRSHQITSAAFHNNQVVAAAFDTLLIV
DLASNSTGSRFKEIKLDDQISAVDIHSFTPGEAAEYIVVATWKMDLVLLSAPEWKRSATV
DLNTDVFARSVMLQELDGVDYVIAGLGDGSLQYFVLDKIKGKVNQPKRVSVGTQPTYLQS
FVARGTTNIFVCNDRPSVIHSSGRKLVFSNVNMKHVYAVCQLNSSVYPNNLAIITETGLV
VGKMDEIQKLHIRSISLPGTPRRVACQPETGTCGFIVMQNPMEFDVDAAGDSEMIEEPEE
PPAKFGQMPAQKFLVTDQTNYQILATFPLLPDETSMALASGNLGNDPRTFYIVGTGISKK
DEKECTNGRILVFQYVDKTLSIVCDAKTRGLPTHMEIFKGKLLVSIGSSLKLMNWNEESQ
ELVTETAMTQFIMPVFFKTKGDFILVGDLMRSISVWLYRSAENKFDMIASDPFARWPTSA
EFIDDDVYALMDDYGNLLFFRRETDPASGDRSDLTEVAAINFSDTVNLIRKGTLLPDTAV
TERPFADGALILGTQAGAIMHILSIDENTYQLLKQLCDKLIRNIIPFGRVNPEKYNTVQR
HAGSVVPAYGVINGDLIEMITTMSSEEVHELIVDMKDASNNPVTVEQVTRIVEDLARSH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacccactcgcccccgattctacgtcgcctcttctgagccggcgggagcggtt
acatcctgcgcctgtggcaatttttttcgaccaacagagcgaaatctggccgtggctaag
aaagatcagctggatatcatgggattcgcgagtgaaggagtgaagatcatcgcgactaca
cgtacatcctccgcaatttctcgcatcctgacaatccatccgtcctgggccaagaacgat
ctgctgttcgttctcatgattaactacgatgtgttgatgttggaattgggcacggatggc
acccatcgtccttatatccgcacggtagccgccggatcggtgcaggataaagtcggcaga
gtgacggagcagagcaaccaggtcgctgtagatcccgagaaccgctgtatcgcgctgcat
atttacgatagtttggtgcgcatcatacctttgaaagacactgctgagccgaaggaaatt
gagagtttcaatatgcgcgttgaggaatgcaacatcggttcgatagtgtttcttcacaat
gctgcgcgaccaactttggctctcctccataaggatttgtacggaactcacatctccagc
tatgaggttgatttccaggagaaagagctcaaaccacccaagaacaagcacgtggagctg
aagaatttggagaacgataccatttccttatgcagtgttcccggaacgaatcagggcgtc
attgcgtgtggttttaatacgctgaccttcgccgatgtggacggtgtgggcattaccgct
ggagtcaagaaggaaaatcgcggtttaggtatcgcctacgcgctgctgcatgattcgccc
accggaaccaaattcttggtgggagacctgtcaggagcactgcatgtgatttttttaaag
aagaccccttccgagaagtctggacacgctcaggtggtcgagtgcggtgtcatttcgttg
ggagtattgactatcacctcctgtttagcgtatctggataatcgggtggttttcgttggt
tcccgattgtcggactccatgataatacggctgcgagacgatccgaatccggaaacaggc
aacctattcgatgtggcagaaactatttccaacatcggttctattacggatttctcacta
gtgcggtctgataatcagggcacgcagccgcagatgattgtgtgctcgggtatggggccg
ggatctcatgctcgcattgtgcgcagtgggatcgggatgcaggagacaacatccctggac
gctccaaccgggcggcagatctttgctctgaactcgcaaagtgctgcttttggaccacat
gattggctggtggccagctttctgagtgaaaccaaagtactgagaatggagaatgaagtg
ggagaatttgaggaccttattgacgtgggtgcattcgtcctgaacgattccactcaactg
gcggcaaaagtgaacgggttgattgtacaagtgactaaaaaaagtattcgaatcatcgtg
cctggtgaactcactttaaaggaagaatggtttccatcggatcgctctcatcagatcact
agtgcagcgtttcataataatcaggtcgttgctgctgcttttgacacattgctcattgtg
gatttggcaagcaactctacaggttcccgctttaaggaaatcaagttggatgatcaaatt
tccgccgtagatattcattcattcactccaggtgaagcagcagaatacattgtggttgcc
acgtggaaaatggatttagtcttgctgtcagcaccggaatggaaacgttctgccacagtt
gatttgaacacggatgttttcgctcgcagcgtcatgttgcaggaactagatggcgttgac
tatgtcattgctggattgggtgatggtagtttgcaatacttcgttttggacaagattaaa
ggaaaagtaaatcagccgaaacgtgttagtgtaggcacccagccgacttatctgcagtcg
tttgtcgccagaggtaccaccaacatttttgtatgtaatgatcgtcccagtgtgatccat
agttcaggccgaaagctcgtcttctccaatgtcaatatgaaacatgtatatgcggtgtgc
cagttgaattcttctgtttatcccaataatttggccatcataacggagactggtttagtt
gtggggaaaatggatgaaattcagaaactgcacatccggtcgatttcgctgccgggaacg
ccgaggcgggtggcttgtcagccggaaaccggcacatgtggatttattgtgatgcagaac
cccatggaattcgatgtcgatgcggcgggagacagcgagatgatagaggaaccggaggag
ccaccggcgaaattcgggcagatgccagcgcagaagtttctggtcaccgatcagacgaat
tatcagattctggccacgtttccacttctgcctgatgagaccagtatggctttagctagt
ggaaatcttggcaacgatccaagaacgttttacattgtgggaacgggaattagcaaaaag
gacgaaaaggaatgcactaatgggaggattttagtctttcagtacgtcgacaagacactg
agtatagtgtgcgacgcgaagaccagaggcttgccgactcatatggaaatttttaagggc
aaattgttggtatcaataggatcatctttaaagttgatgaactggaatgaggaaagccag
gagctggtgacggaaactgccatgactcagttcattatgcctgtctttttcaagacgaaa
ggcgattttatcctcgttggcgatctgatgcgctcgatctcggtgtggttgtatcgcagc
gctgagaacaaattcgatatgattgcatccgatccgtttgcgcggtggcccactagcgca
gaattcattgatgacgatgtttatgcactgatggacgattatgggaatctcttgttcttc
cgccgggagactgatcctgccagtggggaccgctctgatttgactgaagtggctgccatt
aatttttcggataccgttaatcttatccggaaaggaacgctattgcccgataccgccgtt
acagagcgcccgtttgctgatggagcgctgattttgggaacgcaagctggagccatcatg
cacattttgagtattgatgaaaatacttatcagctgttaaagcagttgtgtgacaaatta
atccgaaatatcatcccattcggacgggtcaaccccgagaaatacaacacagtgcagcgt
catgcgggatcagttgtgccagcctacggagttataaatggggatctcatcgagatgatt
accacaatgagcagcgaagaagttcacgaattgattgtcgatatgaaggatgcctctaac
aacccggttacggttgaacaagttacgcgaattgtggaagaccttgcacggtcccattag
DBGET
integrated database retrieval system
