Paramacrobiotus metropolitanus: 129594150
Help
Entry
129594150 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129594150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmeo03041
]
129594150
03009 Ribosome biogenesis [BR:
pmeo03009
]
129594150
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129594150
Spliceosome [BR:
pmeo03041
]
Complex A
U2 snRNP components
U2 related factors
129594150
Complex B
129594150
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129594150
Ribosome biogenesis [BR:
pmeo03009
]
Eukaryotic type
90S particles
Helicases
129594150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_N
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
SRP54
ABC_tran
ResIII
Flavi_DEAD
PhoH
TsaE
AAA_25
AAA_7
T2SSE
TFIIE-A_C
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
129594150
NCBI-ProteinID:
XP_055346710
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSEKKRRLDVGDDSSGRSAKVTRFSDRPGPGGDAPSSSGSATVSGEPTVPPPDLRAPMMS
RNPYNGQPYSQRYYEILKKRFGLPVYEHKNKFMETLAKNQFVVLVGETGSGKTTQIPQWC
VEYVKANPSEPGKKRSVACTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCTSQRT
IMKYLTDGMLLREGMTDPLLENYGVVILDEAHERTLSTDILMGVLKEVAHQRPTLKIVVM
SATLDAGKFQDYFSLGDKDKEAAAEDENAEKKKAPLIMVPGRTFPVEIFYTQEPERDYLE
AAIRTVIQIHMSEEEEGDILLFLTGQEEIDDACKRIKKEIDGLGAEVGELKCIPLYSTLP
PNMQQRIFEPAPPKRPNGALGRKCVVSTNIAETSLTIDGVVYVIDPGFAKQKVYNPRIRV
ESLLVSPISRASAQQRAGRAGRTRPGKCFRLYTEKAYKSEMQEQTFPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDEGELTQAGHMMAEFPLDPQLAK
MVIKSCXMGCSNEFRCLTMLELHSLYFKALLVKEL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaaagcgaagattggatgttggcgatgactcaagtggacgaagcgccaag
gtcacgcgcttttctgaccgaccgggcccagggggagatgcgccctcctcgtcgggttct
gctacggtatccggagaacccacggtgcctccgcctgatctgcgagcgccgatgatgtcg
cgtaacccgtacaatggccagccgtactcgcagcgttactatgaaatcctcaagaaacgc
ttcggtctacccgtttacgagcacaagaacaaattcatggagacgttggcaaagaatcag
ttcgtggtgctcgtaggcgaaactggttcggggaaaacgacacagataccgcagtggtgt
gtggagtacgtaaaagccaatccctctgaaccgggaaaaaagcgctccgtggcctgcacc
cagccacgtcgagtagccgctatgagtgtagcccagcgcgtcagcgaggagatggacgtg
aaattgggcgaggaagtgggttacagtatccgtttcgaagactgcacgtcacagcgcacc
atcatgaaatacctcaccgatggtatgctgctgcgggaagggatgacggatcccctgttg
gaaaactacggggtggtgattctagatgaggctcacgaacgcactctgtcgacggatatc
ctgatgggggtactgaaggaagtggcccatcagcgtcccactttaaagattgtggtgatg
agcgccacgttggatgccggaaagtttcaggactatttctccttgggcgataaagataaa
gaagcagccgcggaggatgagaacgctgagaagaagaaggcaccgctgattatggtgccc
ggccgcacgtttccggtggagattttttatacgcaagaaccagagcgggattatctggaa
gcggcgattcggacggttatccagatccacatgagtgaggaagaggaaggtgatattctt
ctgtttcttactggacaagaggaaattgatgatgcctgtaagcgtataaaaaaagaaatc
gacggtcttggtgcagaagtcggtgaactgaagtgcattccactgtattctacacttccg
cctaatatgcagcagcgtatcttcgagcccgcgccgcccaaaagaccgaacggtgctctg
ggaagaaaatgtgttgtgtcgacgaatattgccgagacatcgctgaccattgacggtgta
gtctacgtgattgatcccgggtttgctaaacagaaggtgtacaatccccgcattcgagtg
gaatcgctgctcgtatcgccaatcagtcgtgctagtgcacagcagcgtgccggtcgtgcg
ggtcgtacacggcccggcaaatgctttcggctgtacaccgaaaaggcttacaagtccgaa
atgcaggagcagacttttccggagattttgcgctcgaatcttggcagtgttgtcctgcag
ttgaagaaattgggcattgacgatttggtgcattttgactttatggatccacctgctccg
gaaacgctgatgcgcgctctggaattattgaattatttgggtgctttggatgatgaaggc
gaattaacacaggccggtcacatgatggcggaattccctcttgatccgcagttagccaag
atggtcatcaagagttgcnngatgggttgttccaatgaattccgttgtctcaccatgcta
gaactacattccttgtatttcaaagctttacttgtaaaagaattgtga
DBGET
integrated database retrieval system
