KEGG   Paramacrobiotus metropolitanus: 129594262
Entry
129594262         CDS       T09028                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
pmeo  Paramacrobiotus metropolitanus
Pathway
pmeo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129594262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmeo03019]
    129594262
   03036 Chromosome and associated proteins [BR:pmeo03036]
    129594262
Messenger RNA biogenesis [BR:pmeo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     129594262
Chromosome and associated proteins [BR:pmeo03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     129594262
    COMPASS/SET1 complex (yeast)
     129594262
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_EML NBCH_WD40 WD40_like WD40_RFWD3 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 B-prop_COPA_B_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_Vps41 SGL Beta-prop_SCAP
Other DBs
NCBI-GeneID: 129594262
NCBI-ProteinID: XP_055346860
LinkDB
Position
Unknown
AA seq 328 aa
MARSGDVSHMTDEMARSYRVAKVFRDNTDSINGMDFSPHGDVFVTSSVDESLTVYDVEKP
GIKATVNSKKYGVENVTFTRNNNLVVHGSTKVDNAIRLLSLKDNKYLRYFPGHTETVTTI
ATHPTEDQFLSGSMDGTVRLWDFNMSNSWASIPFGTGRPVANYDPEGLVMAIGVGSEEIK
LFDIRKIGAPFNTLKPRVQNAAQWTSLKFSPNGTYMLIGTNGSACYVVDAFLGSLVTTFG
GYQNTSNGKSVSIEPCFSPDAQFVFLGSTDQRLHLYNINTKARIGILKSDHTGPILYTKF
NPRYSMIATTCSLSCFWISTVSVASTRN
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcgagatccggagatgtttcccacatgaccgatgagatggcgcgaagttatcgcgtc
gccaaagtttttcgcgacaatacggactcgattaatggaatggatttttcgccacatggt
gatgtatttgtaacgagctccgtggatgaatctctcaccgtatacgatgtcgagaagcca
ggaataaaagccaccgtcaacagtaaaaaatatggcgtggagaatgttacgtttactcgc
aataacaatctcgtggtgcatggatccaccaaggttgacaacgctatccgattgttatcc
ctcaaagacaacaagtatctgcgatatttcccgggacataccgaaacggtaacgacaatt
gcgacacatccgaccgaagaccagtttttatccggatcaatggacggcacggtgcgtctc
tgggatttcaacatgtccaattcgtgggccagcatccccttcggcacgggtcgaccggtg
gctaattatgatcccgaaggtctagttatggcgattggtgtgggatccgaggagatcaaa
ctgtttgatatcaggaaaattggcgcgccgttcaacacgcttaaacccagggtacagaat
gctgctcaatggacctctctgaagttcagtcctaacggcacgtacatgttgattggaacg
aacggaagtgcttgttatgttgttgatgcttttcttggatctcttgttacgacatttggg
ggttatcaaaacacatctaatggaaaaagtgtctccattgagccctgcttttctcctgat
gctcagtttgtgttccttggctcgacggatcagcgactgcatttgtacaatattaacaca
aaggcaaggattggaattttgaaatccgaccacactgggcccattttatatacaaaattt
aacccgcgctactcgatgatcgcaacgacatgttccctgagctgtttttggatatccacg
gtttctgtagcttccacacgaaattga

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