Paramacrobiotus metropolitanus: 129594284
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Entry
129594284 CDS
T09028
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129594284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129594284
03012 Translation factors [BR:
pmeo03012
]
129594284
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129594284
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129594284
Translation factors [BR:
pmeo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129594284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
HA2_C
Helicase_C
HA2_N
OB_NTP_bind
AAA_22
nSTAND3
AAA_19
AAA_30
Ribosomal_S8
NACHT
T2SSE
AAA_16
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129594284
NCBI-ProteinID:
XP_055346889
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MASRKAKGPIDWEEYNDNDESDESESESDDEEDDFEEPDEEDIALMLKNYSLKNGLVEDL
QTVAVPSTSHGSHGSHSSAGPSHGRAHASGALNLQPAKHLRGKALQEFLRTQSRLKKTLQ
KTPEEREKRKDRKERKRQEKAVKKDPKDYPSVYVKPSEQSALERLIADYRNSRNRAGNGH
ETSVPAAMPTASENSVTENTAGVTEADGSEMLDRGDHETEEWQEIVETDTASAPALNLDP
GVQIRLDSLSLQFVDEFSQKRQKPLYKEMLAFRQKLPAWAARKDLLEMVNSSQVCVVSGE
TGCGKTTQLPQFILDDWIERGEGARCSIIVTQPRRISAISVSERIARERAEELGISVGYQ
IRLEKKLPRSHCSILMCTTGVLLQWLNSNRCLEGVSHVIVDEIHEQDILSDFLLIILKDL
LNVRPDLRVILMSATINAEKFSWYFGGCPLMTIPGFTFPVREMFLEDILSVTHYKPRPPK
TPSKKSFRDKEAGFEWEKYCTKLSLLDEAILIFLPGWDDIKKLNNLLSSGFRRDDINLIP
LHSMMPTINQRQVFERSPNKRKIVIATSIAETSITIDDIVHVIDSGKIKMKDFDVKRNLS
TLTAQWVSVSNARQRRGRAGRVKSGVCYYLYTSFQFSKLQMYPLPEMQRTRLDELCLQVK
LLKLGLVAPFVEKAMEPPSPEAVDQAIGLLNMIGALDDKEELTPLGHLLARTPVPPQLGK
MLYLGCIFKCIQPILNIVAMLSYRDPFCTPLGKENEARAQRLNFAVRSKSDHILCHDAIE
DYMKATDRLQFCWDHYMSNNTCIQISKMKKQFVQILHSTGFLKTFDYMHGDANKNKDDVD
LIKAVICGGLYPSLGVMGRSKGKLGANVQSENEKLAVHPKSYFGRGCTERGIVAFFTVVK
TSQVFVHDITLMNNNLPVVLFCKSLRKFERDHVQCVAVDKWLNLKCPDKSYEIIKELRNV
LEEMLSGIYIHGLAKSDTDDPEAEALFERIVKAMQFKYTSPS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggctagcagaaaagctaaaggaccgattgattgggaagaatataacgacaacgatgaa
agcgatgaaagtgaaagcgaatccgatgacgaggaagatgattttgaagagcctgacgaa
gaagacatcgcgttgatgttgaagaattactcgttgaagaacggactggtggaggatttg
cagacagtggcagttcccagtaccagtcatgggtctcacggctcgcactcgtccgcggga
ccatcgcatgggcgtgcgcatgccagtggtgcattaaacctgcaacccgctaagcattta
cgagggaaagcactccaagagttcctgcgcacccagtcgagactgaagaagaccttacag
aaaacgccagaagaacgcgagaaacgcaaagaccggaaagaacggaaacgccaggaaaaa
gctgttaagaaagatccaaaggattatccatcggtatatgtgaagccgagtgagcagagt
gcattggagcgccttatagctgactacagaaactcccgaaatcgcgctggcaacggccac
gaaacatccgtccctgctgcgatgcctactgccagtgaaaacagtgtcactgaaaatacg
gcgggtgtgacggaggccgacggaagcgagatgttagacaggggtgatcatgaaacggag
gaatggcaagaaatagtggaaacggataccgcttctgcgccggcgttgaacttggatccc
ggcgtgcagattcgcctggatagtctgagtctgcagttcgtcgacgaattctcccaaaaa
cgacaaaaaccgctgtacaaagaaatgctggcgttcaggcagaagttaccagcgtgggcc
gctagaaaggatctgttggaaatggttaacagtagccaggtttgcgtggtgagtggtgag
accggttgcggaaaaacaactcagttgcctcagttcattctggatgactggatagaacga
ggcgaaggagcgcggtgcagtattattgttacccagccgcgtcgaattagcgctatatcg
gtgtctgaaagaattgccagagagcgtgctgaggaattgggcatttccgtgggataccaa
attcgattagaaaagaaactgcccaggtcgcattgctctatcttgatgtgcacaacggga
gtgttgttgcagtggctgaattctaaccgatgtttggaaggggtttcccatgttatcgtg
gacgaaatccacgagcaggacattctctctgactttcttttgattattctgaaggacttg
cttaacgtccgtcccgatttacgagtgatcttgatgtccgccactatcaatgctgagaaa
tttagctggtattttggtggttgccctttgatgactataccgggtttcacatttccggtg
cgagaaatgtttttggaagacattttgtccgtaactcactataagccacgaccgccaaaa
acgccgtcaaagaaatcttttcgtgacaaagaagcgggatttgaatgggaaaaatactgt
acgaaattaagcctgcttgacgaagcaatattgatttttctgccgggatgggatgatatt
aagaaactcaacaatttgctgagctcgggatttcgaagagatgatataaatctcatcccg
ctgcattcgatgatgccgacgattaatcagcgacaagtatttgagcgttctcctaataag
cggaagatcgttattgcaacatcgattgccgagacaagtataaccatcgacgatatcgtg
cacgtgatcgattcgggaaagatcaaaatgaaagacttcgatgtcaagcgtaacttaagt
accctcacagcgcagtgggtatccgtgtccaacgcccggcagcgcagaggaagagctggc
cgggtaaagagcggagtgtgctattatctgtacacatccttccagttcagtaagctgcaa
atgtatccgcttccggaaatgcaacgtacgcgcttggatgagctttgtctgcaagtgaaa
ctgctgaaacttggcttggttgctccgttcgtggaaaaggctatggaaccacccagtcca
gaagcggtggatcaggccattgggttactcaatatgattggtgcgttagatgataaagaa
gagttaactccgcttggtcacctgctggcgcgcactcccgtccctccacagctaggaaaa
atgctgtatttgggttgcattttcaaatgtatccagcctatcctcaacatcgtggcgatg
ctgagctaccgtgatccgttctgcacgccgctggggaaggaaaacgaggcccgagctcag
cgtcttaattttgctgtacgatcgaagagcgaccatattctgtgccatgatgctatagag
gattacatgaaggcaacggataggcttcagttttgttgggatcattacatgtcgaacaac
acgtgcatccaaatttccaaaatgaagaaacagtttgtccaaatccttcatagcaccggc
tttctcaagacgtttgattatatgcatggtgatgcaaataaaaacaaagatgacgttgac
ctcatcaaagcggtcatttgcggaggtctttatcccagtttgggagtaatgggacgatcc
aaaggaaaattaggagcaaacgtacaaagtgaaaacgagaagttggcggtgcacccgaaa
agttactttggacgagggtgtaccgaaagaggcattgtggcattttttactgtcgtgaaa
accagccaagtcttcgttcacgacatcacactgatgaacaataacctgccagttgtattg
ttctgcaaaagtcttcgcaagtttgaaagggatcacgtgcagtgcgttgcggttgacaaa
tggctcaatctgaaatgtccggataaatcctatgaaatcattaaagagttgcggaatgtt
ttggaagaaatgctcagtggtatttacattcacggcctggccaagagcgatacggacgat
cccgaagcggaagcactgtttgaaagaattgtgaaagctatgcagtttaaatacacatcg
ccgagctga
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