Paramacrobiotus metropolitanus: 129594300
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Entry
129594300 CDS
T09028
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129594300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129594300
03012 Translation factors [BR:
pmeo03012
]
129594300
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129594300
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129594300
Translation factors [BR:
pmeo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129594300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
HA2_C
Helicase_C
OB_NTP_bind
HA2_N
AAA_19
AAA_22
nSTAND3
AAA_16
NPHP3_N
NB-ARC
AAA_30
Motif
Other DBs
NCBI-GeneID:
129594300
NCBI-ProteinID:
XP_055346916
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MPGNPWKHGSTIFRDYAKTFGQKFAEATIEGLNGLSVGIDVIPLKAKKSEKMYRAISPED
DRMRVNFRFAGQRGNRRAASSASSNQHFGRSHTQPNQAFPGDSRRSAAGDHYSHNYGQPR
FGGSHRGGSSNVFEYGPSGGSDFSSPSTSGHQERGHAPQHPKGLRGKAAADYWRNYGRMK
KAEKIANGTCTKNPKKDRSAELLRMQIPSKDVGSLKRILKAFRENPLPVLNKPKMQPKPK
PACITIDETDDGDVITSWQEEEVEELEEIFDIADAKGEEENLNSVTPLSAEVLSSLSADI
YHDWQKKQRTDAYHNMLSFRKKLPAYIAKEHLLKTVQDNQVCVVSGETGCGKTTQLPQLI
LDDYISRHEGASCRVVCTQPRRISAISVSERIAKERAENLGESVGYQIRLEKRLSRERGS
ILMCTTGILLQWLSSNRNLEGISHIIVDEIHEQDVLSDFLLIILKDLLPIRPTLKIILMS
ATINAQKFSDYFGGCPLVEIPGRIFPVQEHFLEDVLALTNYHPPQDRRDYRRRHANYDHT
KEEFLCKIRQTHPRHVYDAIQDFSDRQIDYELINTLVRHIHRKFPLDEAVLIFLPGWEDI
RKMNTLLESCFSANSMLIIPLHSMIPTVDQRVVFDRPVGRRKVVVATSIAETSITIDDVV
HVIDTGKIKAKHFDVEKNISTLTPQWVSVSNARQRKGRAGRVTSGHCYRLYTSHQFGKFS
PYPLPEIQRTPLEELCLQLKLLRLGKVSPFLQKAMEPPSEQAIQNALDLLMHIEALDDKE
QLTSLGNLLARMPVPPQLGKMMYLACIFGCLNPVLNICAALSYRDPFTAPLGKEQEAQAA
KNAFGENCNGDHLLVHNALEAYKAAVDRREDLRDFCWDNYMFPSTCRQILKMKGQFARIL
HESGFLRSFDLYDPHANRNSDNYAVVRSVIAGGLYPNLGRLRPVKHKKQTPRIMVSEEEI
VSVHPKSCFSPGGVANGVYGPAVFFEKMKTTSLFAYDLSVVSPVAAFLFAKAVLLVAREK
RDANDMTVVIDERLEIGKTNQETFELLCELKTAFHDVLLHIFESPARTEVMNAEARALVE
TVSGLMENM
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtaacccatggaagcatggttccacgatttttcgtgattatgccaaaactttc
ggccaaaaattcgcggaagccactattgaaggtctgaacgggcttagcgttggcatcgat
gttattcctttaaaagcaaaaaaatcagaaaaaatgtatcgcgccattagcccggaggac
gaccggatgcgagtgaattttcgatttgctggccagcgaggcaaccggcgagcagctagc
agtgcttcgtctaaccaacatttcggaagatctcatacgcagccaaaccaggcatttcca
ggagattcacggagatctgcggctggtgatcactattctcacaactacggacagccgaga
tttggaggaagccaccgtggaggctcaagcaatgtattcgagtatggaccgtctggtgga
agcgacttttcttctccttcgacatctgggcatcaagaacgtggccatgctccgcagcat
ccaaaagggctgcgtggcaaagctgccgctgattactggagaaactatggtcgcatgaag
aaggctgaaaaaattgccaatgggacatgtacgaaaaatccgaaaaaggacaggagtgct
gaacttcttcgaatgcaaattcctagcaaggatgtagggagtctgaagcgaattttgaaa
gcttttcgtgaaaatcctttacccgttctaaacaaaccaaagatgcaacctaaaccaaag
cctgcatgcataacaattgacgaaacggacgacggagacgttattaccagctggcaagaa
gaggaggtcgaagaactggaagaaatttttgatattgccgatgctaaaggcgaagaagaa
aatttgaattctgtgacacccctttctgctgaagttctcagtagcctcagcgcggatatc
tatcacgactggcagaaaaagcagcgcactgatgcgtatcataatatgctgagcttccga
aaaaagctaccagcttatatagcgaaagagcatttgctgaagactgttcaggataaccag
gtctgcgttgtaagtggggaaacgggatgtgggaaaactacgcaactgcctcagttaata
ttggatgattatatctcgcgccatgagggggcttcatgcagggttgtatgtacgcaaccg
cggcgaatcagtgcgatttcggtatcggagcgtattgccaaagagcgtgcagagaatctt
ggcgagtcagttggctaccagattcgcttagaaaagagattatctcgggagcgtggatcc
attttgatgtgtaccacggggatactgttgcagtggctgagcagtaatcgaaatctcgaa
gggatttcccacatcattgtcgatgaaatccacgagcaggacgttctgtctgattttttg
ctgatcattttgaaagatctccttccgatccggcctaccttgaaaattattctgatgtct
gctactattaacgctcaaaaattcagcgattactttggcggatgcccattggtagagatt
cctgggcgaatttttccggttcaagaacattttctggaagatgtgctggctctgacgaat
tatcacccccctcaggacagaagagattatcgtcgtcggcatgcgaattatgaccacact
aaggaggaatttttgtgtaaaataagacaaacgcacccccgacatgtttacgacgccata
caggatttttcggatcgccaaatcgactacgagttaatcaacactcttgtgcggcacatc
catcgcaagtttcctttggatgaagcagttttgatttttctacccggctgggaagatatt
cggaaaatgaatactttgctggaaagctgttttagtgctaactcaatgctgattattccg
ctgcattcgatgattcccacggttgatcagcgagtcgtatttgaccgcccagttggtcgt
cgaaaggtcgttgtggctacatccattgcggaaactagtatcacgatcgatgatgtcgta
catgtgattgacactggaaaaataaaagcgaagcatttcgacgtggagaaaaatatcagc
acattgacccctcagtgggtgtctgtatctaatgccagacaacgaaaagggagagcggga
agagtgacgagtggccattgctatcggctgtacacttctcaccaatttgggaagttttcg
ccctatcctcttccggaaattcagcgcacaccattggaagagctgtgtcttcaattgaag
ctccttcgcttgggtaaggttagcccatttctgcagaaggcgatggaacctccgtctgaa
caggccattcagaacgccctggatctactgatgcacattgaagctttggatgacaaagaa
caattaacatcacttggaaatcttttggcgcgcatgccggttcctccgcagttgggaaaa
atgatgtacttggcgtgcatttttgggtgtcttaatccggtgttgaatatctgtgcggca
ttgagctatcgtgatccatttactgctcctttggggaaggaacaagaggctcaagcggca
aagaatgcattcggtgaaaattgtaacggcgatcatctattagtgcacaatgctttggag
gcttataaggcggcagtggatcgaagagaggatttgcgggatttttgctgggataattat
atgtttccatcaacctgcaggcaaattttaaaaatgaaaggccagttcgcccgcattctc
catgagtcgggatttttgcggtcatttgatttgtacgatccgcacgccaatcgaaattct
gataactatgcggttgttcgttctgtcattgccggtggactgtatcccaatctgggtagg
ctccgaccagttaaacataagaagcagacaccacggattatggtgtcggaggaggaaatc
gttagcgtacatccaaaaagttgtttttcccctggaggagtcgccaatggagtttatgga
ccggcagtcttctttgaaaagatgaaaacaacatcactcttcgcttacgatttgagtgtg
gtgtcgcctgtggcagcctttctcttcgccaaagctgtacttttggtagcacgtgagaaa
agggatgcgaacgatatgacggtagtcatcgacgagcgattggaaataggcaaaaccaat
caggaaacgttcgagcttttatgcgaactgaaaacagcgttccatgatgtcttgctgcat
atttttgaatctcctgctcggacggaggtgatgaatgccgaagcgcgagcgttggtggag
acagtctctggtctcatggaaaatatgtga
DBGET
integrated database retrieval system
