Paramacrobiotus metropolitanus: 129595108
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Entry
129595108 CDS
T09028
Name
(RefSeq) uncharacterized protein LOC129595108
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03013
Nucleocytoplasmic transport
pmeo03015
mRNA surveillance pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129595108
09122 Translation
03013 Nucleocytoplasmic transport
129595108
03015 mRNA surveillance pathway
129595108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129595108
03041 Spliceosome [BR:
pmeo03041
]
129595108
03009 Ribosome biogenesis [BR:
pmeo03009
]
129595108
03012 Translation factors [BR:
pmeo03012
]
129595108
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129595108
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129595108
mRNA cycle factors
Stress granule specific factors
129595108
Spliceosome [BR:
pmeo03041
]
Complex C
Other components
EJC/TREX
129595108
Ribosome biogenesis [BR:
pmeo03009
]
Eukaryotic type
90S particles
Helicases
129595108
Translation factors [BR:
pmeo03012
]
Eukaryotic type
Initiation factors
eIF-4
129595108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Pkinase
PK_Tyr_Ser-Thr
CMS1
Motif
Other DBs
NCBI-GeneID:
129595108
NCBI-ProteinID:
XP_055347996
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MDAVIYNVGDTSTSYSYDPKSDFLGEGQFGNVYRARPLDGVHQGVQLALKIAKDTPDGTP
TPGQMAHFSRLVNLMLHLDIKPSNVLMAMGDDQDERMLLGDVDDIRSMRDHHTTSQDVTS
MCGTVGFISPEILRRDMQLPTTNPGRPSDLWSTGCLFLKIAAHVTGDHTEVIGRGEDRQP
VAAIAPARRLMLMADGYVPLTPAVVPEEIAAIIRRCLVVDSTGRISARELFSVVSSCHRE
VETTENRDKQTAEVQLIITILQTNRNNDVTESFIDMRLKQDLLRGVSSYGFKTPSAIQRL
AIVPCLKGRDVIAQSLSETGKTATFAVSVLQIIDTASFECQALVLAPTRGMAEQVKTMLL
GLGRYLDVRCYVCVNSQHGVVKLDQCPHVVVGTPDHVHDLISQRAVSVNALKMFVLDEAE
KTLALGFKEHIYDIFKILPAAIQMVLLSATMTPDVLEVAEKVMRDPIRISAKTDELALEG
IHQFFVDVHREDWKFETLCDLYSTVWISQSIIFCNTHEKAESLTSQMQADSHTVSSMYGE
VSKEEREVIMREFRSGMSRVLITTDRLTRGIDVQSVNLIINYDLPNKCEDYIHRVGHGGR
IGRTGKSCAVSFVTREDVRHLKEIEQYYNTKIEEMPSNIADLL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtaatctataatgttggtgatacatccacctcatacagttatgatcccaag
agcgattttctgggtgaaggccagtttggcaatgtgtaccgcgcccggccgctggatggc
gttcatcaaggggttcagttagctttaaaaatcgcgaaggacaccccggatggtactcca
acacccggacaaatggcccacttttccaggctggtgaatctgatgctgcatctggacatt
aagccaagtaatgtcctgatggcaatgggtgacgatcaagacgagcggatgttacttggc
gatgtcgacgacatacgcagcatgagggatcatcatactacgtcacaggacgtgacttcg
atgtgcggtacagttggtttcataagtcctgaaattcttcgccgcgatatgcaactgccc
accaccaaccccgggcgaccgtctgatctgtggagcactggctgcctgtttctgaagatt
gctgcccatgttaccggagatcacacagaagtgattggccgtggcgaggacaggcagcca
gtggcagcgatagcgccggctcgccgtctcatgctaatggctgacggttatgttccgctg
acgccagccgtcgtcccggaagaaatcgctgcgattatccgccgttgcttagtcgttgat
tcaaccggcaggatttcagcgcgggagctgtttagcgtagtgtccagttgtcatcgggaa
gtcgaaaccacagagaaccgtgataagcagacggcggaagtacaactaatcataactatt
ttgcagacgaatcggaacaacgatgttacggagagttttatcgacatgcggcttaagcaa
gatctgctgcgcggcgtctcctcctatggtttcaagacgccttcggccattcaacgacta
gcgattgtgccctgtttgaaaggccgggatgtgatcgcgcaatccctttccgagaccggg
aaaaccgccaccttcgctgtatctgttctccagatcattgacacggctagttttgaatgc
caggctctagtgttggcgcctacaagggggatggctgaacaggttaaaacgatgctactg
ggattaggccgctatctggatgtgcggtgctacgtgtgcgtaaacagtcagcacggcgtg
gtcaagctggaccagtgcccgcacgtggtggtcggcacaccggatcatgtccacgattta
atttcccagagagctgtgtccgttaacgctctgaagatgttcgtactggatgaagcagag
aaaacattggcgcttggtttcaaggagcacatttatgacatcttcaagatccttcccgca
gccattcagatggtgctgctgagtgccacgatgaccccagatgtactggaagtggcggag
aaggtcatgcgcgatcccattcggatttcggctaagactgatgagttggcgctggaggga
atccatcagtttttcgtcgatgtccatcgcgaggattggaagttcgaaacactgtgtgat
ttgtattccacagtatggatttcacagagtattatcttttgtaatacccacgaaaaggct
gaatccctcaccagtcagatgcaggccgacagtcatacagtcagcagcatgtacggggag
gtgagcaaagaggagcgcgaagtgattatgcgagagttccgtagcggaatgagccgcgtc
ctcatcacaacggatcggctgactcgcggcatcgatgtccagtcagttaacttaattatc
aactatgatctgcccaataaatgcgaggactacatacaccgtgtagggcacggtggccgc
attggacgtaccggtaaaagctgtgctgtcagttttgtgaccagagaggacgttcgccat
ttgaaggaaattgagcagtactacaacaccaagatcgaggagatgcccagtaatatcgcc
gacctattgtga
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