Paramacrobiotus metropolitanus: 129596184
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Entry
129596184 CDS
T09028
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129596184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129596184
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
129596184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
DUF5987
Motif
Other DBs
NCBI-GeneID:
129596184
NCBI-ProteinID:
XP_055349360
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MLKFSYICCPCLFVSFRSIMSASTKTPATTKPPSNASTPASSQSQASGSSMPSSQSNANT
KTFELRVPKKHDRKVFVAKFSNTLGIDFATWKKNAPEFAKEKRVTEDVTKTEEDEKAAPK
VGAGSEFGKEKRDEARKRRFTRRAGNEDSPWIMTDTSSQKKYKGTREGGVQDNSSYYVFS
TTGGVIEAYPISEWYTFVPVQRYKALDAEEAEEAFGKRDKVFNYFNLMYKKRLGKNEEGK
KKEPAKEVRQPAGLFAVHAPSCNSNEWAGITKISDGDDDLMPGEMSDSDEEGAAGDTEAI
SGDAKKGKKGKAKPKKEPKKSRKHKEGDEEDGEPAEESDDGDYEDREVDYESSAESEVDD
LDRALEDIALKGVDEEVAEMEDDDDDDEEKEEGEKDKADGTGDDNAGSESDNEEEDFDAM
ADSVLPAARKIDSVETVAGAASGSGSATRITKEPQGVASATGKGKRKLESESPATASKRG
KGASGPATTPDGKLEAYIRSYLIRKPLTSKELLKKLVTKHGIRPEDLKSRLGEIIKRLNP
EKTNINGKLYMHLKS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagttttcgtacatctgttgcccttgtcttttcgtcagttttcgatccataatg
tcggcaagcacgaaaactccggccactactaaacctccttcgaatgcgagcactccagct
tcttcacagtcacaagcgtctgggtcctcgatgccgtcgtcccagtcgaatgctaatacg
aaaactttcgagctgcgggtgccgaagaagcatgatcggaaagtttttgtggccaaattc
agcaacactctcgggatcgatttcgctacctggaaaaagaacgcgccagaatttgcaaag
gaaaagcgcgttacagaagatgtgacgaaaactgaagaagatgagaaagcagcaccgaaa
gttggcgctggcagcgaattcggtaaagagaagcgtgatgaagcaagaaaacggcgattt
acccgccgcgcaggcaatgaagattctccttggatcatgacggacacttcgtcgcagaag
aagtacaaaggcacacgggaaggtggcgtgcaggacaattcgtcctactatgtgttttcc
acaactggtggtgtgattgaagcatatccgatctctgagtggtatacgtttgttcctgta
cagcgctataaagcactggatgctgaagaagcggaagaagcctttggaaagcgtgacaaa
gtgttcaattacttcaatctcatgtataagaaacgtctcgggaagaacgaagaggggaag
aagaaggaaccggcgaaggaagtgcggcagccagcgggcctgttcgcggtgcacgctcca
agctgtaattctaacgagtgggcgggtattaccaaaattagcgatggtgatgacgatctg
atgccaggtgaaatgtcagattcggatgaggaaggtgcagcaggagacaccgaagctatt
tcaggagacgccaagaaaggtaaaaaaggcaaagccaaacccaagaaagaaccgaagaaa
tcgcgaaagcacaaagaaggggatgaagaagatggagagccagcggaagagagtgatgac
ggtgattatgaagatcgggaagtggattacgaatcttcagcggaatctgaagttgatgat
ctggatcgagcattggaagatatcgctttgaagggtgttgatgaggaagtcgcagaaatg
gaagatgacgacgacgatgacgaggagaaggaagaaggcgaaaaagataaagcggacgga
actggtgacgataacgctggttcggaaagtgacaatgaggaagaggatttcgatgcgatg
gccgactctgttttgcctgcagcgaggaagatcgacagtgtggaaactgtcgctggcgct
gccagtggatctggatcagcgacacgcattaccaaggagccccagggtgtggccagcgcg
actgggaaaggcaagcgtaaactggaaagcgaatcaccggccactgccagtaaacgtgga
aaaggtgctagcggcccggctacgactcctgacggaaaactggaagcatacattcggtct
tatcttatccgaaagcctctgacttccaaggagctcctcaagaaattggtcactaagcac
gggattcgacctgaggatttgaaaagtcgtctgggcgaaattattaaacggctcaatcct
gaaaagacgaatatcaacgggaagttgtacatgcatttgaagagctga
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