Paramacrobiotus metropolitanus: 129597759
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Entry
129597759 CDS
T09028
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03020
RNA polymerase
pmeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129597759
09124 Replication and repair
03420 Nucleotide excision repair
129597759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129597759
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129597759
Enzymes [BR:
pmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129597759
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129597759
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129597759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
129597759
NCBI-ProteinID:
XP_055351402
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MDFDNDIDMEAQDGFDADQSNVAEEIDPNLWQDACWLVISSYFDEKGLVRQQLDSFDEFI
QMSVQRIVEDAPAVEMEAEAQHMDGQLEQPTKHSLKFEQIYLSKPTHWEKDGAPVPLMPN
EARLRNLTYSAPLYVDIRKTVTKAGKEPEETLYPKVFLGKIPIMLRSTYCLLSGMNERDL
AELNECPLDPGGYFIINGSEKVIIAQEKMATNIVYVFSMKDSKYAFKAECRSVMENSSRP
ASTIWVNMLARGGKNVRKSALGQRIVAILPYIKQEIPIIIVFRALGFVADRDILEHIVYD
FEDQEMMEMIKPSLDEAFVIQEQDVALNFIGARGAKPGVTREKRIKYAKEILQKEMLPHV
GTHEFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNL
LKELKINAQKYIDRGRDFNLELSIKTKIITDGLRYSLATGNWGDQRKAHQTRAGVSQVLN
RLTYCSSLSHLRRLNSPIGREGKLAKPRQLHNTLWGMICPAETPEGQAVGLVKNLALMSY
ISVGSQPAPILEFLEEWSMENLEEIAPSAILGATKIFVNGSWVGIHRDPEQLMATLRKLR
RQMDIIVSEVSMVRDIRDREIRISTDAGRICRPLLIVENQKMLLKKQHIELLGDRANTSY
RWQDLIASGVVEFIDIQEEETIMCAMTPFDLVDRSVSGDRQAYCSTYTHCEIHPAMILGV
CASIIPFPDHNQSPRNTYQSAMGKQAMGVYISNFNVRMDTLANVLYYPQSPLVTTRSMEY
LRFRELPAGINAVVAIASYTGYNQEDSIIMNASAIDRGLFRSCFYRAYRDSEGKRMNDNA
ETFERPNRSTCSGMRNAVYEKLDDDGIVEPGTRVSGDDVIIGKTMTLPASDDDASAGQKH
YTKKDSSTFLRASETGIIDQVLLTVNSEGQKFCKIRVRSIRIPQMGDKFASRHGQKGTCG
VTYRMEDMPFTAEGVAPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDTV
NVQKISTLLQDYGYHLRGNEVLYNGFTGRKINSQVFIGPTFYQRLKHMVDDKIHSRARGP
VQILVRQPMEGRARDGGLRFGEMERDCMISHGAAQFLRERLFEVSDPYRVHICNTCGLIA
VANLRNQTFECKGCRNKTQISQVCVPYACKLLFQELMSMSIAPRMMLQ
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacaacgacatcgatatggaagcccaggacgggttcgacgccgaccagagc
aatgttgccgaggaaatcgacccaaatctgtggcaggatgcttgttggctggtaatttca
tcgtatttcgatgaaaaaggtttggtgcggcaacagctggattccttcgacgagttcata
caaatgtctgtccaaaggattgtcgaagacgctcccgcagtggaaatggaagcggaagcg
caacatatggacggtcaactcgaacaaccgaccaagcacagcttaaaattcgagcagatt
tatctgtcgaaaccaacacattgggaaaaagacggtgcacctgtcccgctgatgcccaac
gaggcacgcctacgtaatctcacctattcggcaccgctgtacgtggatatcaggaaaacc
gtaacaaaggctggcaaagaaccggaagaaacgctatacccgaaagtatttttgggcaaa
attcccatcatgttacgatcgacgtactgcttgctcagtgggatgaatgaacgtgattta
gctgaattgaacgagtgcccattggatcctggcgggtattttatcatcaacggatcggag
aaggttatcattgcgcaggaaaaaatggctacgaatatcgtttacgttttcagcatgaaa
gattctaagtatgcctttaaagctgaatgccgatctgtcatggaaaactcaagccgccca
gctagcacaatttgggttaacatgcttgcgcgaggaggcaaaaatgtacggaaatccgcc
cttgggcagcgtatagtggccattttgccttacataaagcaggaaattcctataataatc
gtctttcgggctcttggtttcgtcgccgatcgggatattctggagcatatcgtctatgat
tttgaagaccaggaaatgatggaaatgatcaagccttccttggacgaagctttcgtcatc
caggagcaggatgtggctttaaatttcatcggcgctcgtggtgcaaaaccgggtgttact
agagaaaaacgtattaaatatgccaaggaaattctccaaaaggaaatgttacctcatgtt
ggaacacacgaattttgcgaaacaaaaaaagcctattttcttggatacatggtacatcgc
ttgttactggccgcgcttggacgtcgcgagttagacgatcgtgaccactacggaaataaa
cggttggacttagccggtccgttgttggcgtttttgtttcgaggattgtttaaaaatttg
ttaaaagaactgaaaatcaacgcgcaaaagtatatcgaccgtgggagagattttaacttg
gaactgtctatcaaaacgaaaattattaccgacgggttgcgatattctttggccacagga
aactggggagaccaaagaaaggctcaccaaacccgtgctggagtatctcaggtgttaaat
cggctgacttattgctcttcgttatctcatttgcgacgcctaaattcaccaattggccgt
gaaggcaagctagccaaacctcgtcagctgcacaacactttatggggaatgatctgccct
gcggaaacacccgaaggtcaagcggtgggtcttgtaaaaaatctcgctttgatgtcctac
atctctgtcggctcacaaccagccccgattttggaattcttggaagaatggagcatggaa
aatttggaagaaatcgccccatccgcaattctaggtgccacaaagatctttgtaaatggc
tcttgggtgggtatccatcgggatcccgagcaattaatggccactttgcggaaactaaga
cggcagatggatatcatcgtatctgaagtgtccatggtccgcgacattcgggacagagaa
attcgtatttcaaccgatgccggacgaatttgtcggccgcttttgattgtagaaaaccag
aagatgcttcttaagaagcaacacatcgaattgttgggagaccgggcaaacacgagctat
agatggcaagatttgattgctagtggtgtggtggagttcattgatattcaagaagaagag
accatcatgtgcgccatgacgcccttcgatctagttgaccgatccgtcagcggtgaccgc
caggcgtactgctccacctatacccactgcgaaatccatcccgccatgatcctcggcgta
tgcgcctccattattcccttccccgatcacaatcagtcgccccgtaacacctatcaatcc
gccatgggtaagcaggccatgggagtgtacatcagtaacttcaacgtgcgcatggatacc
ttggccaatgttctgtactatccgcaatcgccactggtcacaacacgatccatggagtat
ctgcgtttccgggaactgcctgccgggatcaacgcggtagtagccattgcctcgtacacg
ggctacaaccaggaggactccatcatcatgaacgcatcggccattgatcgggggctgttt
cgatcgtgtttctaccgcgcctatcgggacagcgaggggaagcggatgaacgataatgcg
gagacgtttgagcgaccgaatcggtccacgtgcagcgggatgcgaaatgcggtgtacgag
aaattggacgacgatgggattgtggaaccgggcacacgtgtatcgggggatgatgttatc
attggcaaaactatgacattgcccgcttcggacgatgatgcaagcgccggtcaaaagcat
tatacgaaaaaggactcgagcaccttcctacgtgccagcgaaacaggaattattgaccag
gtcttgctgacggtgaattctgaggggcagaaattctgcaaaatccgcgtgagatccatc
cggataccgcagatgggtgataagttcgccagtcggcacgggcaaaagggcacttgcggt
gtgacctatcgtatggaggatatgcctttcacggcggaaggtgttgcgcccgatattatt
attaatccacacgccattccttcacgcatgactatcgggcatttaattgaatgtcttcag
ggaaaggtttcagccaataagggcgaaattggcgatgcgacgccattcaacgacacagtc
aacgtgcagaagatctccacactgctgcaggattacggatatcatctgcgtggtaatgag
gtcctgtacaatggcttcacgggacggaaaattaattcccaggtgtttattggacccaca
ttctatcagcgtctcaaacatatggtcgatgataaaatccacagtcgtgcgcgtggcccg
gtgcagattttggttaggcagcctatggaaggtcgtgcaagggatgggggtttgcgtttc
ggagaaatggaacgcgactgcatgatcagccatggagccgcacagttccttcgtgagcgt
ttgtttgaagtatccgatccttatcgtgttcacatttgcaacacgtgcggactcatagcg
gttgcgaatcttcgcaaccaaacatttgaatgcaaaggatgcaggaataaaactcagata
tcgcaagtttgtgtcccgtatgcatgtaaattattgtttcaagaattgatgtcgatgagt
atcgctcctcggatgatgcttcagtaa
DBGET
integrated database retrieval system
