Paramacrobiotus metropolitanus: 129597898 Help Entry 129597898         CDS       T09028                                  Name (RefSeq) 5'-3' exoribonuclease 2-like   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism pmeo  Paramacrobiotus metropolitanus Pathway pmeo03008   Ribosome biogenesis in eukaryotes pmeo03018   RNA degradation Brite KEGG Orthology (KO) [BR:pmeo00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     129597898   09123 Folding, sorting and degradation    03018 RNA degradation     129597898  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pmeo03021]     129597898    03019 Messenger RNA biogenesis [BR:pmeo03019]     129597898    03009 Ribosome biogenesis [BR:pmeo03009]     129597898    03016 Transfer RNA biogenesis [BR:pmeo03016]     129597898 Transcription machinery [BR:pmeo03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      129597898 Messenger RNA biogenesis [BR:pmeo03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      129597898 Ribosome biogenesis [BR:pmeo03009]  Eukaryotic type   Pre-60S particles    RNases     129597898 Transfer RNA biogenesis [BR:pmeo03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     129597898 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N Motif Other DBs NCBI-GeneID:  129597898 NCBI-ProteinID:  XP_055351574 LinkDB All DBs Position Unknown AA seq 1075 aa AA seqDB search MGVPAFFRWLSRKYPSIVVHATEERSRALEDDASGSVPVDTSLPNPNGVEFDNLYLDMNG IIHPCCHPEDRPAPRNEEEMMLLIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSR RFRSSKEAVEKEEEIRRQKQRLREEGVRLPEKPQQDPTEKFDSNCITPGTEFMDNLAKNL RYYVHNRLNNDPGWAGISVILSDANVPGEGEHKIMDFIRKQRANPQHDPNTHHCLCGADA DLIMLGLATHEANFTIIREEFKPGQPKPCELCGQMGHEMKMCTGKAKAVDDQEPPAPPPA TEFIFLRLSVLREYLEQELKPDHAVSYGFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRE GAIDRLIDLYKANADRSGGYLTENGFVNLERVQHVLTELGKMEDGILKNRMHKAKIDRRR EKERERAKRRRDGEEDDRDAKRRRSDGPAYALNGAFSPAAVGRGGAPQPLSNARETIHQA RVDSFRFAQPQNTNLTSAQALRAMLIGGPASAPQSPAGGRHPGASPSGERFQRPASVAGG LERMGSRDGQDDDEDPNDVVRLGEDGWKQRYYMNKFAVAIDGDWQFQKEIVHAYVEGLCW VLQYYYQGCPSWTWYYPYHYSPFASDFTHIDQLRITFPKHTQPFKPLEQLMGVFPAASGN FLPTAWRRLMSDPESPILDFYPSDFCVDLNGKKFAWQGVALLPFVDEGRLLRTLGTVYDT LTAEEARRNGLGQNLLFVGQRHTIFTDLKEKFYPETENAVENWVTMENRLIFGMGGLVAG DAGAYIPFRPLEPPYASMAQVAVNRALSVAYRDPWYELDYKFLAVRLEGAKEPAKVLGEG RAILGFDANRTPVRLDGSAHRMLRGASSNRGSFFQRTVGNDGRRGYNEEREARWEDNPNR FREESRHNNQQRPDYHSRDPPHYNHSQSRDRERWNNGYNDDYRGNHQYNQRSEPPRGSHY DSRPYDRNYDNRRNDYQAPSSYGYQQRDTRYDYQQRDHRSGSQYQEGRGGGAPGYPSYTP PANYAASYSGAGYGHQQPRPTTYYAARGAPSARGTAAPPPAGPTRYYTSDQRRSN NT seq 3228 nt NT seq  +upstreamnt  +downstreamnt atgggcgtccccgcgtttttccgctggttgagccgcaagtacccttccatcgtcgtgcac gccactgaagaacgctcgcgcgcactggaagacgacgccagcggcagtgtcccggtggac acctccctgcccaatcccaacggagtggagtttgataatctctatctggacatgaacggc atcatccacccgtgctgccatcccgaggatcggccggcgccccgcaacgaggaggagatg atgctgctcatcttcgagtacattgatcgcatcttcaacattgtgcggccgcgacgctta ttgtacatggccatcgacggggtggcgccgcgcgccaagatgaaccagcagcgcagtcgc cggttccgttcgtccaaggaggccgtggagaaggaggaggagatcagacggcagaagcag cggttgcgcgaggaaggtgtcaggttgccggagaaaccgcagcaggatcccactgagaaa ttcgacagcaactgcatcacaccgggcacagagttcatggacaatctggccaagaacctg cgctactacgtccacaaccgcctcaacaacgatccgggatgggcgggcatctcggtgatc ctgtcggatgccaacgtccccggagaaggtgagcacaagatcatggatttcatccgcaaa cagcgcgccaatccccagcacgatcccaacacgcaccactgcctgtgcggcgccgacgcc gatctgattatgctgggcctggccacgcacgaggccaacttcaccattatccgcgaggaa ttcaaacccggccagcccaagccctgtgagctgtgcggacagatgggccacgagatgaag atgtgcaccggcaaggccaaagccgttgacgaccaggaaccgcctgcgccaccaccggcg accgagttcatcttcctgcgtttatccgtcctccgcgagtacctggagcaggagctgaag ccggaccacgccgtgtcgtacgggttcgatctggagcgggccatcgacgactgggtgttc atgtgcttcttcgtgggcaacgatttcctcccgcatctgccctccctggagatccgcgag ggcgccatcgaccgcctgatcgatctgtacaaggccaacgccgaccgcagcggcggatat ctgaccgagaacggcttcgtcaatctggagcgggtgcagcatgtcctcaccgaactcggg aaaatggaagacggcatcctgaaaaaccgcatgcacaaagccaaaatcgatcggcgccgc gagaaagagcgtgaacgcgccaaacgccgccgcgacggcgaagaggacgaccgcgacgcc aaacgccggcgctccgacggcccggcctacgccctcaacggcgccttctccccggccgcc gtgggacgcgggggagctccgcagccgctgagcaacgcccgcgagactatccaccaggcc cgcgtggactccttccgcttcgcccagccccagaataccaacctgacctcggcgcaggca ctgcgcgctatgctgatcggagggccggcgtcggcgccgcagagccccgcggggggccgg cacccgggtgcctcgccgtccggggagcggtttcaacggccggctagtgtggccggtgga ttggagcggatggggagtcgggatgggcaggatgacgatgaggatcccaatgatgtggtg cgattaggtgaagacggatggaagcagcgctactacatgaacaaattcgccgtggccatc gacggcgactggcagttccagaaagagatcgtccacgcctacgtcgaaggattgtgctgg gtcctgcagtactactaccagggctgtccctcctggacgtggtactatccctaccactac tcgcccttcgcctccgacttcacccacattgaccaactgcgcatcaccttcccgaagcac acccagccgtttaaaccgctggaacagctgatgggcgtcttcccggcggccagcggcaac ttcctgcccaccgcctggcgccgactgatgtccgaccccgaatcgcccatcctggacttt tacccgagtgatttctgtgtggatctcaacgggaagaaattcgcctggcagggcgtggcg ctcctgccgtttgtcgatgagggacggttgttgcggacgctggggacggtgtacgatacc ctgacggcggaggaggcaaggcggaatgggttggggcagaatttgttgtttgtcgggcag cggcatacgattttcacggatttgaaggagaaattctacccggagacggagaacgccgtg gaaaattgggtgacgatggagaacaggctgattttcgggatgggtgggttggtagcggga gatgcgggggcgtacatccccttccgccccctggaaccgccgtacgcgtcgatggcgcag gtggcggtcaaccgcgcgctgagtgtcgcgtatcgcgatccctggtacgaactggattac aagttcttggccgtgcggttggaaggggcgaaggagccggccaaggtgttgggagagggc cgggccatcttgggattcgatgccaatcgcaccccggtgcggctggatggctcggcgcac cggatgctgcgcggcgcgtccagtaatcggggatcgttctttcaacgaacggtgggcaac gacgggcgtcgcgggtacaacgaggaacgcgaagcccgctgggaggacaaccccaaccgg ttccgcgaggaatcccgccacaacaaccaacagcgtcccgactatcattcccgcgaccct ccacactacaatcactcccaatcacgtgatcgtgaacgctggaacaacggctacaacgac gactaccgcgggaatcaccagtacaaccagcgcagcgaacccccgcgcggtagccactac gacagccgtccttacgaccggaattatgacaaccgccgcaatgattaccaagctccaagt tcgtatggttatcagcagcgggacacgcgctacgactaccagcagcgggatcatcgctcc gggagccagtatcaagaggggcggggcgggggcgcgccggggtatccgagttacacgccg ccggctaactacgcggcgtcgtatagtggcgcgggctacgggcatcagcagccgcgcccg acgacgtattatgcggcgcggggggcgcccagtgcgagggggacggcagcgcccccgccc gccggtccgacgcggtattataccagtgatcagcggcgttccaattaa

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