Paramacrobiotus metropolitanus: 129598711
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Entry
129598711 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04140
Autophagy - animal
pmeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129598711
04148 Efferocytosis
129598711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmeo04131
]
129598711
Membrane trafficking [BR:
pmeo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
129598711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
Clathrin
zf-Vps39_C
TPR_Vps41
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
129598711
NCBI-ProteinID:
XP_055352714
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MLDIYGLVSVLPRLPLTIESLATYEDNIFVGTREGHLIMYKTEFRGTFNKDGIEEAEISL
VKSSKNFSKKPISQLAVIPEFHMLVCLSDNIVSIHDLGSTESGSFPVLDTLSKTKGATLF
TLCTVRDPESKFNTKVTMCVVVRQRLLVYHLKSSYEKKFEEVQTGAKLMVPDTPKCVVWV
NDVLYVNVAGEYQRMRLNGDYDKLFPIDKNQEPKILPLPDGRIAFGYDNRCVFATPDGNI
SRETLTWSGVPNQIAQDAPFLXALFPNYVEIRPYEPAGKGDEAMQRIEIAKAKWACESHT
KGITYIASPTAIWALKSATSVQLIDRLLNAKQFELAENIAKYSTVGESIKTEWFQRIRNI
YAFQLFCDHEFRRSFGLYSELGTEPPFVIGLLPDFLPTVRETMVYPSKLPELTGSSLEKA
TFALIEYLTEWRQKLSLESSRRNGERTEEEIAKSDALMQIVDTSLLKCYLVTNRFLVSTL
LRLPDNHCNFEESERCLKKADRLDELIILYKSKKCHKKALEFLKGQMDLPKSTLAGHLKM
AQYLGEIAKDELDLVFQYARYVIRAKPIDGLKIFTDENFDCIDIPRDRVFEFLNRNAPDL
VVPYLEHIINVWNDETDAFHTALAEAYIKRVAALIKDNGDAVAISELRKTLQGFLAASEH
YTPAVLLAHVPLNCMFEERALILGRMGRFEQALGLYVHVLKDDDKAEKFCEQFYDPKNID
ASQVYYLLFKTYVKPPEPSTLGVLLNDPPSTERKLDEAFRILRRHSSRIDYAKGMELVPK
TVSVAELSDFLITALQVLTARRRQVELMKSLHYAEYLQMQYRRIVWEGEMFTLSEDDTCE
ICRKRIGRNTAFIRTPNKKLRHYACGNIPRR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatttacgggctcgtcagcgttctgcctcgtcttccgctgacgattgagtcg
ttagctacctacgaggacaacatcttcgtgggcacccgcgagggccatctgatcatgtac
aaaacggagttccgtggcacattcaataaagatggcatcgaagaggcagagatatctttg
gtgaaatcaagcaagaatttctccaagaagcccatttcccagttggcagtgattccggag
tttcacatgctggtgtgtttatccgacaacattgtgagcattcacgatctgggctcgacc
gaatcgggcagtttcccggtgctggacacgttgagcaagacaaaaggcgccactctcttc
acgttgtgcaccgtacgggatcccgagtccaaattcaacaccaaagtgaccatgtgtgtg
gttgttcgccaacgattgctggtgtatcacttgaagtcttcatacgagaaaaaattcgag
gaagtgcagaccggtgctaaattaatggtgcccgatacaccgaaatgtgtggtgtgggtc
aacgatgtgttgtacgtgaatgttgccggagaatatcaacgaatgaggttgaacggcgat
tacgacaaactcttccccatcgataagaaccaggagcccaagatcttgccgctgccggac
gggcgtatcgctttcggttacgataaccgctgcgtgtttgccacgcccgacgggaacatt
agccgcgagacgctgacgtggtccggtgtgcccaaccagatcgcgcaggatgccccgttc
ctcnttgccctcttccccaattatgtggagatccgtccgtacgaaccagccggcaagggc
gacgaggccatgcagcggatcgagattgccaaggccaaatgggcctgtgaatcgcacacc
aagggaatcacgtatattgcgtcgcccacggcgatctgggcgctgaagagcgccacgtcg
gtgcagctgattgatcggctgctgaatgccaaacagtttgaattagcggaaaatattgcg
aaatactcgacagtgggcgaatccatcaagacggaatggtttcagcggattcgaaatatt
tatgcgttccagctgttttgtgatcatgaatttcgcagatcgttcggtctgtactctgaa
ctgggcacggagccaccgtttgtaatcggtttactgccggacttccttcccacggtcaga
gaaaccatggtgtatcccagtaaattgcccgaactaaccggctcgtcgctggagaaagcc
acatttgcgctcatcgaatatctaaccgagtggcgacagaaattgagtctggaaagcagc
cgtcgcaatggtgaacgcactgaagaagaaatcgccaaatcggacgcattaatgcagatt
gtagatacatcgctactcaagtgctacttggtaacgaaccgcttcctggtcagcacgctg
ctgcgcctgcccgataaccactgcaactttgaggaaagcgagcgttgcttgaagaaagcc
gaccgtctggatgagctgatcattttgtacaaaagcaaaaagtgccataagaaagcgttg
gagtttttaaaaggccagatggatctgccgaaatcgaccttagctggccatttgaaaatg
gcgcagtatctgggagaaatcgccaaagatgaactggatttggtgtttcagtatgcgcgc
tacgttatccgagcgaaacccattgatggtctaaagattttcacggatgagaattttgac
tgcatcgacattccgcgcgatcgggtgtttgaatttttgaatcggaatgcgccggacctc
gtggtgccctatttggagcacattatcaatgtgtggaacgatgagacggatgcgttccat
actgcactggcggaagcctacatcaagcgcgtggcggcattgattaaagataacggtgac
gcggtggccatctcggagttgcggaagacgttgcagggtttcttggctgcttccgagcac
tatacaccggcggtcctgctagcacatgttccgcttaattgcatgttcgaagaacgcgcg
ctgattttggggcgcatgggtcggtttgagcaggctctcggactgtatgttcatgtgctg
aaggatgacgacaaagccgaaaagttctgtgagcagttttacgatccaaagaacatcgac
gcctcccaagtatattatcttctatttaaaacctacgtcaaaccaccggaacccagtaca
ctgggcgttttgctgaatgatccgccctccacagaacggaagctggacgaagccttccgc
atcctccgccgacacagcagccgtatcgactacgccaagggcatggagctggtgccgaag
acggtgtccgtggcggaactgtcggattttctcatcacggcgctgcaggtgctgacagcc
cgtcgccgccaggtggaactgatgaagagtctgcattacgcggagtatctacagatgcag
taccggcgtattgtctgggagggtgagatgttcacgctgagtgaggatgatacgtgtgag
atctgccggaagcgaatcggcagaaacacagcttttatccgaactcctaataaaaagctt
cgtcattacgcttgtggaaacattcccagacgctaa
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