Paramacrobiotus metropolitanus: 129599205
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Entry
129599205 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129599205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129599205
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129599205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
129599205
NCBI-ProteinID:
XP_055353341
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MGSSEYRRFPRPPDSVNVLQGDRHLSEWVAKIETRLQVNPHDAEGWFALARDAQTRPIEQ
MRQFWERSVSHFPTHPYFWMLYIDQEIKSSYHDEAERLFERCLNKIPSIELNRLHVRYVM
QTKPPVNASNREKISDAYAKAVERVGLDIDAASLYLEYIRFLRDCEAVGSYAEQQRGFAI
RKVFQQAVAVPLNNIEMMWKEYCHFEQEFQAHLAEKITAERSREYTTAKKNVKILESIMR
TLRRDKLPSPPRTLNEERHQIENWKKWLTFERSNSLLLDDANRVAKRIAYVYENSLMCMP
YRIDMWLETAAHYRDWSEKAIVRGDQSTARDVLNAAISCLERAITLYPDRPLFYLVVADI
EEYRKNNKGAKKMYERCLEKVKDTDNPTLPYIHYMLFTRRTEGIQSARIIFGRARQDPRI
TQQIFVASALMEFFCTKEKEVALKISELGMKKYAVNGQYAKIYLDFLMMQNEHNNAKLLV
EKALKLDSLTVQEKLLIAGKSLDYEALLGDYDSIQKCDKSRMDLLNQLQLPSSTSLIGSC
MVGHWNYMDLMPLTESDLTNMDYFENRDATGVCKPSPFALYKGKVEETTTAIKDRMIMPD
LSAMIPFKPRSQNRGYLAVRGGDYALPESLESLKRFLPPPESFAGPFPDLDQIIRLVLEE
GPKSSVELQRAVDGIDPGIRLVSEVIDTASEIXEEKNKTEVDADRRLVSDIYRSRLAKKM
KMEAE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcagagtatcgtcgtttcccgcgtcctccggacagtgtgaatgtccttcaa
ggagatcgtcatctatcggaatgggtggctaagatcgagacacgcctgcaagtcaatccg
cacgatgcagaaggttggttcgcgttggctcgcgacgctcagactcgtcccattgagcag
atgcgccagttctgggagcgttctgtttcacattttcctactcatccctatttttggatg
ttgtacattgaccaagaaattaaaagcagctaccatgacgaagctgagcgtttgtttgaa
cgttgtttgaataagattccctccatcgagcttaatcgtttgcacgtaagatacgtaatg
cagactaagccaccggttaatgcgtccaatcgcgaaaaaatctccgatgcctacgcgaag
gcagttgaaagggttggtttggatattgatgcggcatccttgtacctggaatatattagg
tttttgagggattgcgaagcagtgggcagctatgccgaacaacagcgtggcttcgccatt
aggaaggttttccagcaagcggtggcggttccgttgaataacattgaaatgatgtggaaa
gaatactgccattttgagcaagaatttcaggctcatttagcagaaaaaatcactgcggaa
cgcagccgcgaatacacgacagccaagaaaaatgttaagatattggaatccattatgcgc
actctgcggcgagataaacttccgtctccgcctcgtacgttaaatgaagagcgccatcag
attgaaaattggaagaaatggctgacattcgagcggtcgaattcgttactgctcgacgat
gccaaccgagtagcaaaacgtattgcatacgtatacgagaactcactgatgtgcatgccc
taccggatcgacatgtggctggaaacagctgcgcactaccgagactggtcggaaaaggca
attgtcagaggtgaccagtcaaccgcccgggatgttttgaatgcggcgatctcctgcctg
gagagagccatcacattgtatcccgaccgtccactattctaccttgtcgttgccgacatt
gaggaataccgaaaaaacaacaaaggtgccaagaaaatgtacgaacgctgcttggagaag
gtcaaggacaccgacaatcccacgctgccctatatccactacatgttgttcacacggcgc
acggaaggcattcagtcggcgcggattatattcggccgagcacgccaagatccacgcatt
acgcagcagatatttgtggcatccgcattgatggagttcttttgcacgaaagagaaggaa
gtagccttgaaaatctcggaattgggcatgaagaagtatgccgttaatgggcagtatgcg
aagatttacttagacttcctcatgatgcaaaatgaacataacaacgccaagctgttggtg
gaaaaagcactgaaactggactccctgactgtccaggaaaaactgctgattgcgggcaaa
agtctggattatgaggcgttgttgggcgattacgacagtattcagaaatgcgataaatcg
cgcatggatttattaaatcagctgcagcttccctcgtcgacttcgctaatcggatcgtgc
atggttggtcactggaactacatggatctgatgccgctgaccgagagtgatttgaccaat
atggactactttgagaatcgtgatgccaccggcgtatgcaaaccgtccccgtttgcctta
tataaaggtaaagtcgaagaaaccacgacagccatcaaagaccggatgatcatgccggat
ctgtcagccatgattccattcaaaccccgatcgcagaaccgcggatatctagccgtgcgg
ggcggtgattatgccttaccggaaagcctggaaagtctgaaacgtttcctcccgcctcca
gagagctttgccgggccgttccccgacttggatcagattatacggttggtgctggaagaa
ggtcccaagtcgtcggtggagctgcagagagcggtggacgggatcgatccgggtattcga
ctggtatccgaggttatcgacaccgccagtgaaatannggaagaaaagaacaaaaccgaa
gtggacgctgacaggcggcttgtgtccgacatatatcgttcccggttggcgaaaaagatg
aaaatggaagctgaataa
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integrated database retrieval system
