Paramacrobiotus metropolitanus: 129599368
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Entry
129599368 CDS
T09028
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pmeo
Paramacrobiotus metropolitanus
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmeo01009
]
129599368
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129599368
04131 Membrane trafficking [BR:
pmeo04131
]
129599368
03036 Chromosome and associated proteins [BR:
pmeo03036
]
129599368
Enzymes [BR:
pmeo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129599368
Protein phosphatases and associated proteins [BR:
pmeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129599368
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129599368
Membrane trafficking [BR:
pmeo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129599368
Chromosome and associated proteins [BR:
pmeo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129599368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
DUF2098
Motif
Other DBs
NCBI-GeneID:
129599368
NCBI-ProteinID:
XP_055353563
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MCITARELNKHSTKTNGSYISRSTPIGMAGSGHICGKAISIRLAAEKLLLPVAFEYNPEI
IIVSAGYDAAVGCPEGLMKVTPAAYGHMTHALSCLAGGKLAVMLEGGYFLESLAESAVCT
IESLLGLPPCPLPSLGAPHPVVATAILDAISVLRPYWKSLAFQETDKTKTRSHRITYPVH
TPRILFDPPKEIPGHNTCFSSAPLRPASEIVDLRYQVRELRVIYDAFRAALPVNRSCYVY
DEIMLNHIPDTHLPEVPARISRIYNYLNRKLLPKCVHLPSRNVTEAELNLIHEKNFTKLI
LETPANFYREGSRRINNMHVKLKDRWANDLDVSLGTQPATLVAAGSLLNIVDAVVQGKCL
NGYAIVRPPGHHAHHTYPAGFCFANNVAIAAQHAIEKYGLKRILIVDWDVHHGDGVQELF
YKDPRILYISLHRGKEDFYPPSRKDVGYVGAEKGYGFNVNIPWSHKGMHNGDYVAAFLQL
VMPLAYEFSPELVFVCSGFDAALNDPLGECCLTEIGYETMTKMLLALAGGRVIVALEGGY
NLEMLEKCSESVMKALMGFASAAEPISLCPSSRAVKDIKAAADAHIFPKHNWKCLQYRVT
LLEPVDQTEANPKQQDKKKKEINPGDLADALRDVHLNSGVGV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatcacggccagggaactcaacaaacattctacgaagacgaacgggtcctatatt
tctcgatccacacctatcggaatggccgggagtggccatatctgcgggaaggcaatttcg
atcagattggcagcggaaaagctactactgcccgttgcttttgagtacaacccggagatt
attattgtgtccgctggttacgatgccgctgtcggctgtccggaaggacttatgaaagta
actccggcagcgtacggccatatgactcatgcgttatcttgcttggccggaggaaagttg
gctgtcatgctggaaggtggatactttttggaatcgttggcagaaagtgccgtttgtacg
atagaatcacttcttggactgccaccatgccctttgccatctttgggcgcaccccatcct
gtggtggccactgctattttggatgctatcagtgttttgcgaccgtattggaaatctttg
gcctttcaggaaaccgataaaacgaagacgcgttcgcaccgtattacgtatcctgtgcat
acgcctcggatcctcttcgacccgccaaaggagataccgggtcataatacatgctttagc
tcagctccgctgcgcccagcgtccgaaatcgtcgatctgcgctatcaagtgcgagaactt
cgcgtgatttatgatgccttccgagctgcattgccggttaatcggtcgtgctatgtttat
gatgagattatgctcaaccacatccccgacacccatctcccggaagtgccggcacggata
tcccgcatttataattatttaaataggaagcttctcccgaaatgtgttcatttgccgagt
cggaacgtcacggaagcagagctaaacttgattcacgagaagaattttacaaaattaatt
ttggagacgccggctaatttttatcgcgagggatcacggcgaattaataatatgcacgtg
aagcttaaggaccgctgggccaacgatctggacgtttccctgggaactcaaccggcaacg
ctggttgcggctggatcgttgttgaatattgtggatgcggttgtacaaggaaagtgtctc
aatggatacgccattgtaagaccccctggccaccatgcccaccacacctacccggcggga
ttttgtttcgccaataatgttgcaatcgctgcgcagcacgccattgaaaaatatggttta
aaacgaattttaattgttgactgggacgtgcaccatggcgatggtgtacaggaattgttc
tacaaagacccgagaatattgtacatttctctgcatcgcgggaaggaggatttctatcca
cccagccggaaagatgtgggttatgtcggcgcggaaaaggggtacgggttcaatgtgaac
attccgtggagtcacaagggaatgcacaatggggattacgtcgcggcgtttctccagctg
gtcatgccgctggcgtacgagttttcgccggaattagttttcgtatgttccggtttcgac
gctgctttgaatgaccccttgggagagtgctgtctgacggaaatcggatacgaaacaatg
accaagatgctgttggcgctggccggcggccgcgttattgtggcactggaaggcggctac
aatctagagatgctagagaagtgctcggagagcgttatgaaagccctgatgggattcgca
tcagccgctgagccgattagcttgtgtccatccagtcgtgcagtgaaagacattaaggct
gctgcggacgctcatattttccccaagcataactggaaatgcttgcagtatcgcgttacc
ctcctggaaccggttgaccaaacggaagcgaatcccaagcaacaagacaagaagaaaaaa
gagattaatcccggtgatttggccgatgcgctgcgggatgttcatttgaattcgggggtt
ggagtttaa
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