Paramacrobiotus metropolitanus: 129599695
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Entry
129599695 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04382
Cornified envelope formation
pmeo04512
ECM-receptor interaction
pmeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129599695
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129599695
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129599695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmeo04147
]
129599695
00536 Glycosaminoglycan binding proteins [BR:
pmeo00536
]
129599695
Exosome [BR:
pmeo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129599695
Glycosaminoglycan binding proteins [BR:
pmeo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129599695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129599695
NCBI-ProteinID:
XP_055353981
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MAMDSRFSLSLWPLLRLAVVVVLVIVARSSTVDAVVCEGCAQPQQCKCYGSKGEAGAFGL
PGLQGPPGAPGYLGLEGPPGRPGLGGERGDAGSIGQKGQRGDSGQSGAQGPPGMDGLMGL
EGPRGNPGIDGCNGTDGAPGAPGLPGGYGPPGQDGAPGYPGYVGPKGIKGDAGDGGINSD
GTKGNAGTPGFAGRPGPPGQPGRDGPVGPRGQPGRPGIPGPAGNPGPPGLPGIGRRGEPG
DRGVPGQQGRPGHTQGWQPGPIGDNVAYVQAPDGAPGEKGSMGDDGLPGRPGNPGESGRP
GFSGRKGEKGAIGDAGPQGKTGKDGPMGAPGFKGHSGYPGLPGLDGAKGELGSKGFAGEP
GRRGYPGDAGSPGLTTYDQGGSPVGPPGPPGEQGFKGDRGYPGRQGRPGAEGPRGEQGTP
GVDGQAGRPGLPGAIFPGDYGDDGIPGADGIPGEPGTPGEQGPVGDKGPIGETSLGTPGY
PGRGGRPGALGPKXGMVGERGFSGEKGEPGRTWTEHSPGWPGSKGLLGEMGSRGPEGQPG
RDGNKGDRGDDCGVCRGSAPGYKGDRGDFGLPGQPGLLGAPGLAGLAGRRGQPGYQGKRG
GDGEKGVDGLNGVRGAKGDAGEPGIVIFPPLPPGTKGSKGDAGMGGAPGPRGRPGGPGYP
GLTGAPGRPWSQGEIGDLGDAGSAGFPGLPGTPGRPGNQGPPGEQGPSDVAGPQGRKGSQ
GRPGPRGLDGVKGLKGQPGDMWGWDGLEAERGDRGFPGLPGRNGFNGAKGAKGDAGRDGT
PGWKGAAGDEGYPGGQGQPGQIGAKGAGGVKGDEGFSGMPGLPGRRGMPGLPGVPGIKGD
RGEDGTGIGTEGMPGLPGYAGPKGAAGAAGDDGGPGLPGLSGRPGLPGQPGGQGRPGAPG
LAGPKGDAGEALNAPVGPKGFPGEFGQPGYPGLKGQRGQDGVPGLDGPKGYKGDYGGDGM
PGRPGAPGIRGRPGTPGFNGAPGAAGPKGFKGDEGQQGLPSSQAPPGVPGNPGAKGMAGD
EGLPGLAGRPGYPGAKGMAGTPGLPGLQGRPGESGGEGLRGFKGDRGQDGFPGNPGRPGQ
PGFAGVKGMRGENGIVYPGAEGAKGFPGRPGQPGYFGRKGEVGDGGIPGAPGVEGIKGER
GDRGFDGAPGVPGGQNQKGARGEVGAPGRPGAPGPAGDDGGAGLPGTKGPRGHSGMPGQP
GLPGGPGGKGAKGDDGGPGLPGRPGFVGRRGDTGRPGLPGGPGARGDDGLPGFPGAKGMA
GNAGIPGRPGLPGVRGAPGAPGKDGYPGEDGIPGISPKGARGDAGRPGIPGAPGFGGAKG
DQGYQGRPGTPGRPGDVLGGGTGPKGFKGDAGGFGAPGLPGADGLPGDSGLPGLKGPKGD
QGYPGPPSPPGLEGAKGFRGDGGRPGQPGFPGLKGARGDDGYPGAPGLKGMTGDGGGPGT
PGAPGIPGRKGDRGEPGPDAQQLPPIPGLKGDKGDDGDNGANGQPGAPGFQGGPGPKGVM
GDRGINGFPGRPGIPGGAGQDGQPGSRGAPGQDGYDGRPGLPGRPGDAGPPPRPRGFLYA
IHSQTAVVPRCPAGTSALWTGYSLLFIQGNSRAAGQDLGAPGSCMKKFSTAPFMFCSILN
QCNYANRADYSYWLSTEAPMPMSMENIYGQAIQPFISRCAVCETETQMIAVHSQSLYVPQ
CPAGWQGMYSGYSFAMHSAAGAEGNGQSLVSPGSCLQEFRASPFIECHGTGGCNYFATTL
SFWMTVQEEQQQWSKPRPQTLKAGDVRAKISRCQVCRRISGAAAGQQQPPDRFVPPHTLQ
QGQQGRPPAAQDRSAILSASRG
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggattccaggttttccctgtcgttatggccgttattaaggctggccgtggtg
gtggtcttggtgattgtagcgcgttcatcgaccgtggacgctgtggtttgtgaaggatgt
gctcaacctcagcagtgcaaatgttacggaagcaagggcgaagcgggcgctttcggcttg
ccgggcctgcaaggcccacccggtgctccgggttatcttggtttggaaggtccaccaggc
cgtccaggtcttggtggtgaaaggggagatgcgggatctatcggacagaaaggtcaacgt
ggtgattctggtcagtccggtgcgcaaggacctcctggcatggatggtctcatgggtctg
gaaggaccgcgaggtaaccccggtattgatggatgcaacggcactgatggcgctcctggt
gctcctggacttccgggaggctacggtccgcctggacaggatggtgctccgggttaccca
ggttacgttggaccaaagggaataaagggcgatgccggcgatggtggcatcaattcggat
ggcactaagggaaacgccgggacgcctggtttcgccggaagaccgggacctccgggtcaa
ccgggccgcgacggaccagtaggaccaagaggacaaccaggccgaccgggcatccccgga
cccgcaggcaatcctggtccacctggattgcccggtattggacgacgtggtgaacctgga
gaccggggtgttcccggccaacaaggcagaccaggtcatacacaaggttggcagcccggt
cctataggtgacaatgtggcatacgttcaggcgccggatggtgcacccggtgaaaaaggt
tccatgggagatgatgggcttcctgggcgccctggaaatccgggtgaatcaggacgaccc
gggttttctggtcgaaaaggagagaaaggcgctatcggtgatgcaggtccacaaggcaaa
actggcaaggacgggccaatgggtgcacctggtttcaaaggtcactctggctatcccggt
ctgcccggtttggatggtgctaaaggcgaactgggaagcaaaggttttgccggtgaacca
ggtcgacgaggttatccaggagacgcgggttcacccggtctgacaacctatgaccaaggc
ggcagtccagtgggaccaccaggacctcctggagagcagggattcaaaggagacagaggc
tatcccggtcgccaaggtcggccgggagcggagggtccgcgtggtgaacagggcacccct
ggtgtagatggtcaagcaggtcgtcccggtcttcctggtgcgatattccccggagactat
ggtgacgacggtatacccggcgctgatggaattcccggcgagccaggaactccaggcgag
cagggcccagtcggtgacaagggcccgattggtgaaaccagtctcggaacccctggatat
ccgggtcgtggtggccgcccgggtgccctcgggccaaaanngggtatggtcggagaacgt
ggattctctggagaaaagggcgaacctggacgcacgtggactgagcattcgcctggttgg
cccggcagcaaaggcttgctgggtgagatgggatcccgtggaccggaaggccaacccgga
cgagatggaaacaagggtgatcggggtgacgactgtggcgtttgccgtggatcagctccg
ggatacaaaggtgaccgcggtgactttggtcttcccggccaacctggacttctgggcgca
ccgggcttggctggtcttgccggccgccgcggtcaacctggttaccaaggcaaacgcgga
ggtgatggtgaaaagggtgttgatggactgaacggtgtccgcggcgctaaaggtgacgcc
ggtgaaccgggtatcgtcatcttccctccactgccgcctggaacgaagggctcgaaaggg
gatgctggaatgggcggtgcaccgggaccacgtggtcgcccaggcgggcctggttatccc
ggacttaccggagctcccggaagaccatggagccaaggtgaaataggagacttgggcgat
gctggttcagccggttttcccggtcttccgggtacccccggtcgacccggcaaccagggt
ccaccgggagagcaaggaccttcggacgtcgccgggccacaaggccgcaagggctctcaa
ggtcgcccgggtccgcgcgggttggacggtgtgaaaggtctgaaaggtcagccgggtgat
atgtggggctgggatggcctggaagccgagagaggcgatagaggtttccccggtctgcct
ggtcgcaatggctttaacggagctaagggtgccaaaggagatgctggtcgcgatggcact
ccaggatggaaaggagccgctggtgatgaaggttaccctggcggacaaggacagcccggt
caaattggagctaagggtgcaggaggcgttaaaggcgacgaaggcttttccgggatgccg
ggactaccaggtcgccggggaatgccgggtttacccggagtacccggtattaagggagac
cgtggcgaagacggcacaggaatcggtaccgaaggcatgcccggattaccaggttacgcc
ggcccaaagggagccgctggcgcagccggagatgacggtggaccaggattgcccggtctc
tcaggccgtcctggcctgccaggacagccaggtggccaaggacgccccggtgcacccggt
ttggccggaccgaaaggtgatgcaggcgaggctcttaatgctcccgtcggtcccaagggt
ttccctggagagtttgggcaacccggttaccctggcttaaagggacagcgaggccaggac
ggtgttcccgggttggatggtccgaagggctacaaaggagattacggtggtgatggaatg
cctggccgacctggagctccgggtattagaggcagacccggaactcccggatttaacgga
gctcctggagcagctggtccgaaaggcttcaaaggtgacgaaggacagcaaggcctacca
agttcacaagcgccgcctggagtgcccggcaatccgggagccaagggcatggcgggcgac
gagggacttccgggactcgccggacgaccaggctacccgggtgccaaaggcatggccggt
actcccggtctgcctggtctgcagggcaggccgggtgaatccggtggggaagggcttcgc
ggtttcaagggagatcgcggacaagatggattccctggtaaccctggtcgacctggacaa
cccggtttcgctggcgtcaagggtatgcgcggtgagaacggaattgtctatccgggagcg
gaaggcgctaaaggcttccctggccgccctggtcagcctggttacttcggccgcaagggt
gaagttggtgacggcggtattcctggagcgccaggtgttgagggtatcaaaggagagcgt
ggagaccgcggtttcgacggtgcacccggtgttcctggaggccaaaaccagaagggagct
cgaggtgaagttggagcccctggccgaccaggagcgcctggacctgcgggtgatgacggt
ggcgctggcctgccgggtacgaaaggtccacgcggccattccggtatgcccggacagcca
ggtctgcccggtggaccgggtggtaaaggtgccaaaggagacgacggcggacctggtctg
ccgggtcgccctggatttgtgggacgacgaggagacacgggacgtccgggattgcccggt
ggaccgggagcacgcggtgacgatggtctaccgggtttcccgggagcgaagggaatggct
ggaaatgctggtattcctggacgtccaggcttgcccggtgttcgaggcgcaccaggtgcg
cctggtaaggatggttatcccggagaggacggcatacccggaatttctcccaagggagca
cgtggtgacgctggtagacctggtattcctggagcgcctggtttcggtggtgcaaaggga
gatcagggttaccaggggcgtcctggaactcctggacgtcctggagacgttttaggaggc
ggtactggtcctaaaggattcaaaggcgacgccggtggtttcggtgctcccggtctgcct
ggagctgacggtctgcccggtgacagcggcctgcctgggctcaagggcccgaaaggtgac
caaggttatcccggacccccatctccgcctggtctggaaggtgccaaaggtttcagaggc
gacgggggccgaccaggacaacctggcttccctggtctgaaaggcgcccgtggcgatgat
ggttacccaggtgctccgggtcttaagggcatgactggtgatggcggtggccctggtact
cctggtgcaccaggtatacccggtcgcaagggtgaccgtggagagcccggtcccgatgcg
caacaacttccacccataccggggcttaaaggcgataagggagacgatggagataacgga
gccaatggtcagcccggtgcacctggtttccagggtggtccgggtccgaagggagttatg
ggagatcgcggtatcaatggcttccctggtagacctggtattccaggtggtgctggacag
gatggacaacctggatcacgcggagcaccgggtcaggatggttatgacggtcgaccgggt
ctgccgggtcgccctggcgatgccggcccgccccccagaccccgcggattcttgtacgct
atccacagtcagaccgcggtggtaccgcgctgcccggctggtaccagtgctctgtggact
gggtattcgttgctctttatacaaggaaattcgcgcgccgctggtcaagatcttggcgct
cccggcagctgcatgaagaagttcagcactgctccgttcatgttctgctccatcctgaac
cagtgcaattatgccaaccgcgccgattacagctactggttgtcgaccgaagcacccatg
cccatgagtatggagaacatctacggacaagccattcagccgttcatcagccgttgtgct
gtatgcgaaacagaaacacagatgatcgccgtccacagtcagtcactatatgtgccgcag
tgcccggctggatggcagggaatgtactccggctactcctttgccatgcacagcgcagcc
ggcgcagagggcaacggtcagagcctcgtgtcacccggcagttgcctacaggaattccgt
gcctctcccttcatcgagtgccacggcacgggcggctgcaactacttcgccaccactctc
agcttctggatgacagttcaagaggagcagcaacagtggagtaaaccccgtccgcagact
ctcaaagccggcgatgtccgggccaagattagccggtgccaagtgtgtcggcgtatctcc
ggcgcggccgctggacaacagcagccgccggaccgctttgtcccgccccacacgctacaa
caagggcaacaaggacggccaccggctgcgcaggaccgctcagccatcctcagtgccagc
cgtggttaa
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