Paramacrobiotus metropolitanus: 129599719
Help
Entry
129599719 CDS
T09028
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03018
RNA degradation
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129599719
09123 Folding, sorting and degradation
03018 RNA degradation
129599719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129599719
03041 Spliceosome [BR:
pmeo03041
]
129599719
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129599719
mRNA degradation factors
5'-3' decay
Lsm complex
129599719
Spliceosome [BR:
pmeo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129599719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
GRP
SM-ATX
Motif
Other DBs
NCBI-GeneID:
129599719
NCBI-ProteinID:
XP_055354006
LinkDB
All DBs
Position
Unknown
AA seq
142 aa
AA seq
DB search
MLPLSLLRGALNHPVLVELKNGETYNGQLANVDNWMNLNLKDVICTSKDGERFWKIAECY
VRGSSVKYMRVPDEVAELVKADMARNKSRPDKRPAGGYQGGGGGRGGGRGGQNRGRGGPG
RGGGKSFRGGGPGRGAPRNGED
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctttatctcttcttcgtggcgctttgaatcatcctgtgctggtggagttaaaa
aatggagaaacatataatggacagctagccaatgtggataattggatgaacttaaatctg
aaagatgttatttgtacttccaaagacggagaacggttctggaagatagcggaatgttat
gtccgtgggagttcagttaaatacatgcgcgtacctgacgaggtcgctgagctggtgaaa
gcagacatggccagaaataaatccagacctgataaaaggccagccggcggctatcaaggg
ggcggcggaggccgagggggtgggcgtggtggacagaatcgtggccgagggggaccagga
aggggtggcgggaaatcgtttcggggtggaggaccaggcaggggagcgccaaggaatgga
gaagactga
DBGET
integrated database retrieval system
