Paramacrobiotus metropolitanus: 129599813
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Entry
129599813 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid receptor RXR-alpha-B-like
KO
K08524
retinoid X receptor alpha
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129599813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmeo03000
]
129599813
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmeo03310
]
129599813
Transcription factors [BR:
pmeo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
129599813
Nuclear receptors [BR:
pmeo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
129599813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129599813
NCBI-ProteinID:
XP_055354116
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All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MNNFSPFPLETPAFPTPPPYPARTAPPLHHSPISSSDSDRADDGEDLLRRLSSGDLFVPS
QLLPPVLPPSSSPSSHVMQHQPPGQGTSAAPPPSSAATSSGGTTSPTGPGSNQGFPPHHP
LSMSKHLCAICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACREDRNCLVDKRQRNRC
QYCRYEKCLQMGMRREAVQEERQRSKAARAGSALHMSSTASNDSESERATSATPTVNPWS
SSSASGADFSVDKLLAADSIMLGSFLHEQEGAQVRPLDLALLTATLHQPEANRQLVEVCE
RELHQAAQYARMCPLIGEMPLSDQVALIKCGWNELHLSAMGARAVFAGVAHGLVLSTGMC
ITPSQAHLFGLSGLIERMSSELIAKMSELRVDNYELACLRGIILFNPDAKGLSNADRIEA
CRELLYSALEEHCQQHHPTDLSRFAKLLLRLPSLRSIGLKCLEPLFFSQLFPTLPFDTFL
YKLIQSPTRDLRQIALEVETDEYHKRLRTPLATPSPMNSLTAEFFAAFGNPPGSAGSAAS
GAITPVSPPDAGGFGYGAGGFIKQEQNHPY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttctcccccttccccttggagacccccgccttccccacgcccccgccgtat
cccgcgcgcaccgccccgccgctgcaccattcacccatcagctcgtcggatagcgaccgg
gccgatgatggggaggatctgttgagacggttgagtagtggtgatttatttgtgcccagt
cagctgctgccgccagtcctaccgccctcgtcgtcgccatcgtcacacgttatgcaacac
caacccccgggtcagggcaccagcgctgcgccacccccgtcgtcggcagccacgtcctcc
ggtggtacgaccagtcccacgggaccgggcagtaatcagggatttccaccgcatcatccg
ctatccatgtccaaacatttgtgcgccatctgtggggaccgggcgtccgggaaacattac
ggcgtctacagctgcgaaggatgcaagggcttcttcaagcggacagtgcggaaggagcta
acgtacgcgtgccgcgaagatcgcaactgtctggtggacaaacgccagcggaaccgctgt
cagtactgccgctatgagaaatgcctgcagatgggcatgcgacgtgaagccgtccaagag
gaacgccagcgttccaaggcagcgcgcgccggcagcgccctgcacatgagcagtacggcc
agcaacgacagcgagtcggagcgggccaccagcgccaccccgacggtgaacccctggagc
agcagcagcgcatcaggggcggacttcagtgtggacaaactgctggccgccgactccatc
atgctgggctccttcctgcacgagcaggagggcgcgcaggtgcgcccgctggatctggcg
ctgctgacggccaccctgcaccagccggaagccaaccgccagctggtggaggtctgcgag
cgggagctgcaccaggccgcgcagtatgcgcgcatgtgcccgctcatcggcgagatgccg
ctcagcgaccaggtggccctcatcaaatgcggctggaatgagctgcatctgtcggcgatg
ggtgcgcgtgctgtatttgccggtgttgctcacggactggtcctgtccaccgggatgtgt
attacgcccagtcaggcgcatttattcgggctcagtggtctcattgagcgaatgtccagt
gaactgatcgccaagatgtccgaactccgcgtggacaactacgagttggcgtgcctgcgc
gggattatccttttcaatccagacgccaaaggcctgtccaatgcggaccgcatcgaagcc
tgccgggagctgctatacagcgccctggaagagcactgccagcagcaccaccccaccgac
ctgtcgcgcttcgccaagctcctcctccgcctgccgtccctgcgcagtatcggtctcaag
tgcctggagccgctcttcttctcccaactctttcccaccctccccttcgacaccttcctc
tacaagctcatccagtcccccacgcgcgatctccgccagatcgccctggaagtggagacc
gacgagtaccacaaacgcctgcgcacgcccctggccacgcccagccccatgaacagtctg
acggcggagttcttcgcggccttcgggaacccgccgggcagcgcggggagtgccgccagt
ggcgcgattaccccggtgtcgccccccgatgccggggggttcgggtacggggcgggcggg
tttattaagcaggagcagaaccatccctactag
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