Paramacrobiotus metropolitanus: 129599976 Help Entry 129599976         CDS       T09028                                  Name (RefSeq) symplekin-like   KO K06100   symplekin Organism pmeo  Paramacrobiotus metropolitanus Pathway pmeo03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pmeo00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     129599976  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pmeo03021]     129599976    03019 Messenger RNA biogenesis [BR:pmeo03019]     129599976 Transcription machinery [BR:pmeo03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      129599976 Messenger RNA biogenesis [BR:pmeo03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      129599976     U7-dependent histone pre-mRNA processing factors      129599976 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  129599976 NCBI-ProteinID:  XP_055354326 LinkDB All DBs Position Unknown AA seq 1373 aa AA seqDB search MTGVVDNPQENEAVYQRVVGLMHAAQETGNDLDARLTHLLSAKEVILSKSPELIDNFWAE MVATRHTRKLKAVAFCLDWIRDACKKEPLLIKERNIFSKELLLRLMEDPAVVVQKRSLIC ATQIYRNAMRWICSGDVTEGNAEPVWQELRGVKEHLVQAISGAEHAENHVGYRLLSYKFL QTLIECQSPRDAAVPPDPEDNVSSLDIPDKWSGSKLSRRSVEAEASAMLDVLEGFVTRQT LTTEYVDCISVCGCLLGLARRRPQYLPRVMTAVEFLLTNIPAGYTKLHVEGLRKYLKTGL ICVLRRCPDPEMLDRTVQLLTRHFGTSHNEIYRNRANITEMLRKKKREPEPEVVVKRPKL EDHYQDDEDEGEPEVAPRQAPEPLVDYQSLATEINTNTIVPRLTPDVVVRLIIANMRRLP TSIPTQFHATYTPIGSGPASGILEHLARLMALQMVAADVGPGSEEVAKRKKEESLRKNEE EDAKSAATAQPISSVLRAPPSEEAAALDLENGDADSGDEAAEGDTAGSVPEAVASGPVPE EFKATEKAFKLEEMTEAIPPDDRSNAILSIVNELIGSEPNVLNASAESLFHKCLVHFAVR VGLEALRERIAKFIMEDLGSRAELAFRWIFEEYAYARHIQRTGQPPPGAGENEEDLSEEQ LASYDDCLTRFIKGFIDHPEYREGLVSQLYMEVPWVTEGAVELLSYYCTLRSVHGAMRLI HKLVSTRPRPARYILPALDLTLHQRKDIQAQAVQTCVKLYSSMPSLRPQVQTFAIDCMNM LGAGDPAALQQDKYGRAPEKKPEWNEDLQRICSSLFAGILAEDASLLPVLGEMYVQHAND VKKTIFKIVDLPVRTIGMNAPEMLAFVRNPPKGSEALVLRVIHLLTETNPPTAELISSIR GLYAERIPDVRFLIPILNGLPKEDIVAALPKLVKLNPVVVQEVFHRLLGTGKHKLDSTQR RPSLSPAEVLIELHKIDMTKVDAKSLIKATGLCLEEKELYPADTMMEVLKNLIDAEPLPF LLLRTVLQTVQLHGHRTTYFIMNILNKLIDREVWTYPLLWEGFVKCCEKTLPPSIPVLLR LPSERLKAALDSSPALRGPLQKHLLDLHAEQRAHLPPDTLQLLDLDRLLNQHREPREPEE PVPRTNDAPPKSPPAAARAVSPPGRRKEGRRSPSRSREPSSRPRERSRGAEKEKEGGKAR ERGERSRGSGETSRARREKGEREEGAERRRRGGRDRSRERKDGSGSRRRREERRKSARDN DEKPSAPLDNGVLAVDAESPPAADTGRPEPADPGNPEVAMDVGVVSEKPEETMEVGVAHD QPELGVVQDVAKDVPDVATPAEGVQDPPEPDAGMASPEVVAADAIPRPDSPQL NT seq 4122 nt NT seq  +upstreamnt  +downstreamnt atgacgggtgttgttgataatccacaagaaaacgaagcagtgtatcaaagggtggtcggg ttgatgcacgcggcgcaggaaacgggaaatgatctggacgcgcgactcacgcacttactc agcgcgaaagaggtgattctgagcaagagcccggagctgatcgacaacttctgggcggag atggtggcgacacggcacacgcgcaaactgaaggcggtggccttttgtctggactggatc cgcgacgcctgtaaaaaggagccgctgctgataaaggagcgcaacatcttctccaaggaa ttgttgctgcgtttaatggaggatcccgccgtcgtcgtgcagaaacgcagtctcatctgc gccacacagatctaccgcaacgccatgcggtggatctgttcgggtgacgtgacggagggt aatgcggagccggtgtggcaggagctgcgcggcgtgaaggagcacctcgtgcaggccatc agcggcgccgagcacgccgagaaccacgtcggctaccgcctgctctcctacaaattcctc cagaccctcatcgagtgccagagtccccgcgacgccgccgtcccgcccgatcccgaggac aacgtgagctcgctggacattcccgacaagtggtccggcagtaagctaagccggcgcagc gtggaggccgaggccagcgcgatgctggacgtcctcgagggcttcgtcacgcgccaaacc ctcacgaccgaatacgtggactgtattagcgtgtgcggctgcctgctggggctggcgcgc cgccggccgcagtacctgccgcgcgtcatgacggccgtggagttcctgctgaccaacatc cccgccggctacaccaagctgcacgtcgagggcctgcgcaagtacctcaagaccggattg atctgcgtgctgcgccgctgtcccgacccggagatgctggaccgcaccgtgcagctcctc acgcgccacttcggcaccagccacaacgagatttatcgcaaccgcgcgaatatcacggag atgctgcggaagaagaagcgcgaaccggagccggaagtcgtggtgaagcgtccgaaactg gaggatcactatcaggacgacgaagacgaaggggagccggaagtggccccgcggcaggcg ccggaacccctggtcgactaccagtcactggccaccgaaatcaacaccaacaccatcgtc ccgcgactgacgcccgatgtcgtcgtccgccttatcatcgccaacatgcgccgcctgccg acgagcatccccacgcagttccacgccacgtacacgcccatcggcagcggcccggcctcg ggcatcctggagcacctggcccggctgatggcgctgcagatggtggccgccgacgtcggg cccggctccgaagaggtcgccaaacgcaaaaaggaggagagtctgcgtaagaacgaggaa gaggacgccaagtcggcggccaccgcccagcccatctccagcgtcctgcgggcgcccccc tccgaggaggcggccgcgctggacctggagaacggcgacgcggacagcggcgacgaggcg gccgagggcgacaccgccggcagcgtcccggaggcggtggccagcggcccggtgcccgag gagttcaaggccaccgagaaggccttcaagctggaggagatgacggaggccatcccgccg gacgaccgcagcaacgccattctctccatcgtcaacgaactgatcggatcggagccgaat gtcctcaacgcttccgccgagtcgctcttccacaagtgtttagtgcattttgccgtacgg gtcggcttggaggccttacgcgagcgcatcgccaagtttatcatggaggatctgggcagc cgggcggagttggcctttcgctggatcttcgaggagtacgcgtatgcccggcacattcag cggacggggcagccgccgccgggggcgggggagaatgaggaggacctgagtgaggagcag ttggccagctacgacgactgtctgacgcgcttcatcaagggcttcatcgatcatcccgag taccgcgaagggctggtgtcgcagttgtacatggaggtgccgtgggtgacggagggcgcg gtggagctgctgagctactactgcacactgcgcagcgtgcacggcgccatgcgcctcatc cacaaactggtcagcacgcggccgcgccccgcgcgctacattctgccggcgctggacctg acgctgcaccagcgcaaggacatccaggcgcaggccgtccagacctgcgtcaaattgtac tccagcatgccctccctgcgcccccaagtccagacgttcgccatcgactgcatgaacatg ctgggcgccggggatccggcggcgctgcagcaggacaagtacggccgggcgccggagaag aagccggagtggaacgaggatctgcagcggatttgttcgtccctgttcgccgggattcta gccgaggacgcctcgctgctgccggtgctgggcgagatgtacgtccagcacgccaacgac gtcaagaagaccatcttcaagatcgtcgacctcccggtgcggacgatcgggatgaacgcg ccggaaatgctggccttcgtgcgcaatccccccaagggcagcgaggcgctggtgctgcgc gtcatccacctcctcaccgagaccaacccgccgacggcggagctgatcagcagcatccgc ggcctgtacgccgagcgcatccccgacgtgcgcttcctcatccccatcttgaacggcctg ccgaaggaggacattgtggccgcgctgcccaaactggtcaaactcaacccggtcgtcgtg caggaggtcttccaccgcttactcggcaccggcaaacacaaactcgattccacgcagcgc cggccgtcgttgtcgccggcggaagtgctcattgaactgcacaaaatcgacatgacgaag gtggacgccaagagtctcatcaaagcgacgggactgtgtctggaggagaaggagctgtac ccggccgacacgatgatggaggtgctgaagaatctgatcgacgcggagccgttgccgttt ctgctgctgcgcaccgtgctgcagaccgtgcagctgcacggccaccgcaccacctacttc atcatgaacatcctcaacaaactcatcgaccgcgaggtgtggacgtatccgctgctgtgg gagggcttcgtcaagtgctgcgagaagaccctgccgccctccatcccggtcctcctccgt ctcccttcggagcgcctcaaggcggccctggacagcagccccgccctccgcggccccctg cagaagcacctgctggacctgcacgccgagcagcgcgcccacctcccgccggacaccctc cagctcctcgacctcgaccggctcctcaatcagcaccgcgaaccccgggaacccgaggaa ccggtcccgcggaccaacgacgccccgcccaagtcgcccccggccgcggcgagggccgtc agccccccggggcgccgcaaggaggggcgccgcagtccctcgcgctcccgggaaccctcc agccgcccgcgggagcgttcgcgcggcgccgagaaggagaaggagggcgggaaggcccgc gaacgcggcgagcggtcgcgcgggtccggggagacgtcgcgggcgcgccgggagaagggg gagcgggaggagggggcggagcgccgccggaggggcggacgagaccgcagtcgcgagaga aaggacggcagtggctcccgccggcgacgcgaggagcgccgcaagtcggcgcgcgacaat gacgagaagccgagcgcgccgctggataacggcgtgctggcggtggacgccgagagcccg ccggcggccgacacgggccgcccggagccggcggaccccgggaacccggaagttgcgatg gatgtgggcgtggtcagtgagaaaccggaagaaacgatggaagtgggcgtggcccacgac caaccggaattgggcgtggtccaggacgtggcgaaggacgtcccggacgtggcgaccccg gcggagggtgtccaagacccgccggagccggacgccgggatggcgagcccggaggtggtc gcggcggacgcgattccgcgtccggacagtccgcagttgtga

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