Paramacrobiotus metropolitanus: 129602616
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Entry
129602616 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pmeo
Paramacrobiotus metropolitanus
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmeo03036
]
129602616
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmeo00535
]
129602616
Chromosome and associated proteins [BR:
pmeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129602616
Meiosis-specific proteins
Cohesin complex and associated proteins
129602616
Proteoglycans [BR:
pmeo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129602616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
DEAD
ATG16
EzrA
OmpH
AAA_29
Rsa3
Motif
Other DBs
NCBI-GeneID:
129602616
NCBI-ProteinID:
XP_055357663
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MYIKEVTIQGFRSYKDQTAVEPFSXKHNVVVGKNGSGKSNFFKAIQFVLGDESEFGARLG
ADSRQSLLHEGTGNKVHTAYAEVVFDNTDGRIPVEGDEVVIRRTISAKQDQYTLNGKTAT
KQDVANLFETAGFSKSNPYYIVKQGKVNELSTAPVEKRLNLLKEVAGTKVYDERRAESQE
AMKETSEKSEQIHKAISNMEDRLKTLEEEKEELKKYQHLDKKRRVLEHTVFTKDLEEVRA
KVSALEIKSEEKDTSLKGLRAEMRKFGDEIQKVEKVHRETKSKVAQFEEEKRQVLQELEE
HHHRETQLELSIKDCETDDEQVKSNKRQWDRELRDLRDKIEQTEIRLQQLAPXYNEAVAE
QDAVNKDLQTKKQQRSELFAKQNRGDRFRSKEERDKWLSTELKRVGALITDKSNTLKAAE
KKLDGDRQKIKQLENSINGLEKAVTXKSEQYKRDQIVFYEDKRAKEELVGTRNDLWRKQH
SLQEELNLKKDELRKRKNDLQSQMGKSILRGVDGVRMVMNEWNEDQNKQEYVQGYHGLLI
DCIVCDEMVYTAVDTVAGNKLFYHVVDTDTIAAKILEEVNRRNLPGEFNFLPLNRLSVKE
VEYPDLGDVEALPLINKISSPQEVERAVKFIFGKTLVCRYLELATDLCKQYNMDCVTPDG
DTASRRGTMTGGYLNRRESRMMLQKYIREITKEEQRVQEQLDEVKTELDKYEADLQDKNN
KLSSLETKLERIKAQNERNKIELGKSKEEFRSLQNGIEPREKSIAEIRTEIAVLETTKHT
LEQERGTELTSVLSDSERRNIDSLDAEIRNLTKQMQNLSEKRRNLEMQKSNLQNSLQDNL
KRREDELKGSIQESTAESSGHRLLSLKQERDMVNRAVAKLQNDIVELDKKLDELIDQRRN
TAAELERLRSKERELQEKILAESRELDKIINRLVLMQKEKDECLHKIRELSALPAGVDNS
EYMKKSARELGRDLDKVNEELKKFGHVNQRALDQYVTFSEQRTKLLSRRDELDRGEKSIA
DLMDNLEHQKYEAITRTFQQVTRNFELVFKELVPQGRGLLTLLKGSEESTVEDTQPSMEE
LNKFTGIGVKVTFTGGTGEMKDMNQLSGGQKTLVALATIFAIQKCDPAPFYLFDEIDQNL
DPDHRKSVGRMIERLSNNAQFITTTFRSELLEHADKFYGVKYDPNLKVSRIQAIKKQEAQ
DFIADDESQGNTELASSSNFKNLSANGSLQSFNAADETSDVAGDVEMFDGTVAVESVDEE
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaggaggtgacaattcaaggatttcgcagctacaaggaccagacagccgtt
gagccattttccnctaagcataacgttgtcgttggaaaaaatggctcgggaaaaagcaac
ttcttcaaagcgattcagtttgttctgggcgatgaatcggaatttggagcacgtctcggt
gctgattcccgtcagagccttctccatgaaggaaccggaaataaagtccacacagcgtac
gctgaagtggtgttcgacaacacggacggtcgaatccccgtcgagggcgatgaagtcgtt
atccgtcgcaccatctccgccaagcaggaccagtacaccttgaatggaaaaacagccaca
aaacaggatgtggctaatctattcgagacagctggattctccaagagtaatccctattat
atcgtgaaacagggaaaagtgaatgagctctccacagcgccagtcgagaagcgtttgaat
ttgctgaaggaagttgctggaacgaaagtatacgatgagcgtcgcgctgaaagccaggag
gccatgaaggagacgtctgaaaaaagcgaacaaatccacaaagcaattagcaacatggaa
gatcgactgaagacgctagaagaagagaaggaagaactgaaaaaataccagcatctcgat
aaaaaacggcgcgttctggagcatacagtgttcacgaaagatttggaagaagtccgcgcg
aaagtgtcggctctggagatcaagagcgaagaaaaggatacatcactgaaagggctgcga
gccgaaatgcgcaaatttggtgatgaaatccagaaggtggagaaagtgcaccgtgagacg
aaatcaaaggtggcccagtttgaagaggaaaaacgccaggtgctacaggagctggaagag
catcatcatcgagaaacacagctggaactcagcataaaagattgtgagaccgacgatgaa
caggtgaaatcaaataaaagacaatgggaccgagaattgcgcgatttgagagacaagatc
gaacagacagaaattaggctgcaacaactggcccccnagtataacgaggcggtcgcggag
caggatgctgttaataaggatttacagactaaaaagcagcagcgaagcgaattgtttgcc
aaacagaatcgcggtgaccggttccgcagtaaagaagaacgggataaatggctatcaacg
gaactaaaacgcgttggtgcgcttattactgacaaaagcaatactttaaaagcggctgaa
aagaagctggacggcgatcgccaaaaaatcaagcagctggaaaatagtattaacggtctg
gaaaaagctgtgactngaaaaagcgagcagtataaacgcgatcagattgtcttctacgaa
gataaacgagccaaagaagaactggtagggacgcgtaatgacctctggaggaagcagcat
agtctccaggaagagctaaatctgaaaaaggatgagcttcgcaaaagaaaaaatgatctg
cagtcacaaatgggtaaatcaattctccgcggagttgatggtgtacggatggtgatgaac
gagtggaatgaggaccagaataaacaagaatatgtccaaggttatcatggtcttcttatt
gattgcatcgtttgcgatgagatggtttataccgcggtggatactgttgctggaaataag
ttattctatcatgtcgttgacaccgacaccatcgcagcaaaaattctggaagaggttaat
cgtcgcaatctgccaggagaattcaatttcttaccactgaaccggttgagtgttaaggag
gtggagtatccggatttgggtgatgtggaggcgcttcccttaatcaacaagatctcatct
cctcaagaggtggaacgggctgtgaaattcattttcggaaagacattagtctgccgctac
cttgagcttgctactgatctctgtaaacagtacaatatggattgtgtcactcccgatggg
gatactgctagtcgtcgtggaaccatgaccggaggttacctcaaccgcagagagtctcgc
atgatgctgcagaagtatattcgtgaaattacaaaggaagaacaacgagtccaggagcag
cttgatgaagtaaaaaccgaactggacaaatatgaagccgatctgcaggacaagaacaat
aaactttcttcgctggaaacaaagctggaacgaataaaagcgcaaaatgagcggaataaa
atcgagctgggcaaatctaaggaagagtttcggagcttgcaaaacggaattgagccacga
gaaaaaagtatcgcagaaattcgcacggaaattgctgttctggaaaccaccaagcacacg
ttggaacaggaaagagggaccgagttgaccagcgtcttatcggatagtgagcgtcgtaat
atcgattctctggacgctgaaattcggaacttgacgaagcaaatgcaaaacctgtccgaa
aaacgtcgtaatctggaaatgcagaaaagtaatctgcagaacagtcttcaagataacctt
aaacgtcgtgaagatgaattaaagggttctattcaagaatctacggcggaaagcagtggg
caccggcttttatccttgaaacaggaaagagatatggttaatagggccgtagcaaagctt
cagaatgatattgttgaactggataaaaaattggacgagctgatagatcaacgccgaaat
acggctgccgaacttgaacggctgcgatcgaaggagagggagctacaagaaaagattttg
gccgaatcgcgggagcttgataaaattattaatcgtcttgtacttatgcagaaagaaaaa
gatgaatgcctacataaaattcgagagctgtcggctctgcctgcgggagtggataattcg
gaatatatgaagaaatctgctcgagaactagggagggatttagacaaagtcaacgaggaa
ctgaagaagtttggccatgtcaatcaacgcgcccttgatcagtacgtcactttctcggag
caacgtaccaaactattgagtcgccgagacgagcttgaccgcggtgaaaagtcgattgct
gaccttatggacaacttggaacaccagaaatacgaagctattacacgcacatttcagcaa
gttacccggaacttcgaacttgtttttaaagagttggttcctcaaggccggggactgttg
acattgttgaagggatcggaagagtccactgtggaagatactcagccatccatggaagaa
ctcaataagtttactggtatcggcgttaaggttacttttactggcggcacaggggaaatg
aaggacatgaatcagctttctggtggtcagaaaacactggtggctttggcaacgatattt
gccattcagaaatgcgatccagcaccgttttatctgtttgatgaaatcgaccaaaatctt
gatcctgatcaccgtaaatccgtaggacgtatgatcgagagattaagtaataatgcacag
tttatcaccacaacattccggagtgagttgttggaacacgcagataaattttacggagtc
aaatacgatcctaatttgaaggtcagtcgcattcaggctatcaagaaacaggaagctcag
gatttcattgccgacgacgaaagtcaggggaacactgaactggcgtcttcgtcgaatttc
aaaaatctttctgccaatggatcattacagtcgttcaatgccgctgacgaaacttcggac
gttgcaggagatgttgaaatgttcgacgggacagtcgcggtcgaatctgtcgacgaagaa
tga
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