Parabacteroides merdae: INE87_00021
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Entry
INE87_00021 CDS
T07751
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer02024
Quorum sensing
pmer03060
Protein export
pmer03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
INE87_00021 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
INE87_00021 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
INE87_00021 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmer02044
]
INE87_00021 (ffh)
Enzymes [BR:
pmer01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
INE87_00021 (ffh)
Secretion system [BR:
pmer02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
INE87_00021 (ffh)
Eukaryotic Sec-SRP protein
INE87_00021 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
cobW
Zeta_toxin
SRPRB
CbiA
AAA_33
AAA_17
NTPase_1
APS_kinase
AAA_18
MMR_HSR1
NACHT
DO-GTPase1
T2SSE
TsaE
AAA_16
ATP_bind_1
AAA_24
AAA_31
KTI12
Motif
Other DBs
NCBI-ProteinID:
QUT47611
LinkDB
All DBs
Position
19993..21318
Genome browser
AA seq
441 aa
AA seq
DB search
MFENLSERLDRSFKLLKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKAKAL
GQNVLTSVKPSQLMVKIVHDELADLMGGTATDLDLKGSPAIILMSGLQGSGKTTFSGKLA
NLLKTKKNKKPLLAACDVYRPAAIEQLRVVGEQVGVPVYMELENKNPVEIAMNAIREARA
KGNDVVIVDTAGRLAIDEQMMKEIAAIKSAIQPDETLFVVDSMTGQDAVNTAKEFNERLD
FDGVVLTKLDGDTRGGAALSIRTVVDKPIKFVGTGEKMDALDIFHPERMADRILGMGDIV
SLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFISQIQQIKKMGNLKELASMIPGVGKALK
DVDIDDNAFKSIEAIIYSMTPEERTNPAILNGSRRQRIAKGSGTTIQEVNKLIKQFDETR
KMMRMLTAAKPGSKKFPSFRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttaagcgaaaggttagacagatcgtttaaactgttgaaaggtgaaggt
aagatcacggaaatcaatgtggctgaaacattgaaagatgtgcgtaaagcattacttgac
gccgacgtaaactataaagtagccaaaggttttaccgatacggtaaaggcgaaagcatta
ggacagaatgtgcttacatccgttaagcccagtcagttaatggttaagattgtgcatgat
gagttggcagacctgatgggaggaacggctaccgatctggatctgaagggtagtccggca
atcatcctgatgtccggtttgcaaggttccggtaaaacgactttttcaggtaagttggca
aatttgctgaagactaagaaaaataaaaagccgctgttggcagcttgtgacgtgtatcgt
ccggccgctatcgagcagttgcgtgtggtcggcgaacaggttggagtacctgtttatatg
gaactggaaaacaagaatccggtggagattgcgatgaacgcgattcgcgaagcacgtgcg
aaaggcaacgatgtcgtgattgtcgataccgctggtcgtttggctattgacgagcagatg
atgaaagagatcgctgcgatcaagagtgctattcagccggatgaaaccttgttcgtggtc
gattccatgactgggcaggatgctgtcaacacggcgaaagaattcaacgagcgtctcgat
tttgacggtgttgtcctgacgaagctcgacggtgatactcgcggtggtgccgctctttct
atccgaacggtggtcgacaaaccgatcaagttcgtcggaacgggcgaaaagatggatgct
ttggatatcttccaccctgaacgtatggcagaccgtatccttggtatgggtgatatcgtt
tctttggtggaacgtgcgcaggagcagtatgatgaagaagaggccaaacgcttgcagaag
aaaattgccaagaatcagttcgacttcaacgactttatttctcagatccagcagatcaag
aagatgggtaatctgaaagagctggcctctatgattccgggcgtaggcaaggctctgaag
gatgtggatattgacgacaatgctttcaagagcatcgaagcgatcatctactccatgact
cccgaagaacgtacgaatccggcaatcctgaacggttcacgtcgccagcgtattgccaaa
ggtagtggtacgacgatccaggaagtgaacaagctgatcaagcaattcgatgaaacgcgc
aagatgatgcgtatgctgacggctgccaaaccgggaagcaagaaatttccttcattcaga
agataa
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