Parabacteroides merdae: INE87_00148
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Entry
INE87_00148 CDS
T07751
Name
(GenBank) Bacteriodales T6SS TssH (ClpV) protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmer03110
]
INE87_00148
Chaperones and folding catalysts [BR:
pmer03110
]
Heat shock proteins
HSP100
INE87_00148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
Sigma54_activat
AAA_22
TniB
nSTAND3
AAA_14
IstB_IS21
Mg_chelatase
AAA_18
NACHT
NBD_SMAX1
AAA_28
AAA_7
Zeta_toxin
Roc
Torsin
AAA_3
AAA_25
AAA_24
AAA_19
ATPase_2
T2SSE
DNA_pol3_delta2
ResIII
EHN
Methyltransf_9
Motif
Other DBs
NCBI-ProteinID:
QUT47731
LinkDB
All DBs
Position
158026..160614
Genome browser
AA seq
862 aa
AA seq
DB search
MNLNNFTIKSQEAVQQAVQLATQNGQQAIEAVHLLKGVIMTGESVTNFIFQKLGVNIQNL
NRVLDAQISSLPKVSGGEPYLSSEANTVLQKAIGYSSKMGDQYVSLEPIILALFTEKSTA
SQILKDAGMTENELRQAIEELRKGNKVTSQSAEDTYDALGKYAINLNERARSGKLDPVIG
RDDEIRRVLQILSRRTKNNPILIGEPGVGKTAIAEGLAHRIVRGDVPENLKSKQIFSLDM
GALVAGAKYKGEFEERLKAVVGEVTKSDGEIILFIDEIHTLVGAGKGEGAMDAANILKPA
LARGELRSIGATTLDEYQKYFEKDKALERRFQIVMVDEPNELDAISILRGLKEKYENHHK
VRIKDDAIIAAVQLSTRYITDRFLPDKAIDLMDEAAARLRLQIDSVPESLDEVSRRIKQL
EIEREAIKRENDKGKLEQLNKEIADLKDEETKQKAQWQSEKEQINKIQQNKIDIENLKFE
ADKAEREGDYGKVAEIRYGKIKQKEEEIREVQEKLKTMQGASAMIKEEVDSEDIADVVSR
WTGIPVSKMMQSEKEKLLHLESELHTRVIGQEEAISAIADAVRRSRAGLQDPKRPIGSFI
FLGTTGVGKTELAKALAEYLFDDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQL
TEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGS
SLIRENFEKMTPETHDQVVDETKVQVLELLKKTIRPEFLNRIDDIIMFTPLNEEEIRKIV
TLQLNSVKKMLAQNGIALEFTDAALAFISDKGFDPQFGARPVKRVIQKYVLNELSKELLG
GTVNKDRPIIIDSDGSGLVFKN
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaacaattttacaattaaatcacaggaggcagttcagcaggccgtgcaactt
gctacccagaatgggcagcaggcgatcgaagccgtacatttgctgaaaggtgtcattatg
acgggtgaaagtgtgaccaatttcatcttccagaaactgggtgtcaatatccagaatctg
aatcgtgtattggatgcgcagatcagttcgctaccgaaggtatcaggcggagaaccttac
ctgtcaagtgaagcaaatactgttttgcagaaagcaatcggctattcatccaaaatggga
gaccagtatgtgtctttggagccgattattttggccttgttcacggaaaagagcactgct
tctcaaattctgaaagatgccggtatgacggagaatgaattacgccaagcgattgaagaa
ttgcggaaagggaataaagtaaccagccagtcggccgaagacacatatgatgcactgggg
aaatatgcgatcaatctgaacgaacgtgcccgtagcggcaagttggatccggtgatcggt
cgtgacgacgaaattcgccgtgtacttcagatcctgagtcgtcgtacgaaaaacaacccg
attttgattggtgaaccgggtgttggtaagacggcgattgccgaggggcttgctcatcgt
atcgtccggggtgacgtaccggaaaatttgaaatcgaaacagattttctctttggatatg
ggagctttggttgccggggccaaatataagggcgaatttgaagaacgtttgaaagctgta
gtgggtgaagtgactaaatcggatggggaaatcattctttttatcgatgagatccataca
ttggtcggtgccggtaagggcgaaggtgcgatggatgccgccaatatcctgaaacctgct
ttagctcgtggtgaattgcgttcgatcggtgcgacgacgctggatgaatatcagaagtat
tttgagaaggataaggcgctcgaacgtcgtttccagattgttatggtggacgaaccgaac
gaattggatgctatttccatcctgcgtggtttgaaggaaaaatatgaaaaccaccataag
gtccgtatcaaagatgatgccatcattgcagccgtccagttgtctacacgatacatcact
gaccggttcttgcccgataaggcgatcgacctgatggatgaggcagcagcccgtttgcgt
ttgcagatcgactctgtgccggaatctctcgacgaggtttcccgccgtatcaagcaactg
gaaatcgagcgtgaagcgatcaagcgtgaaaatgataaaggaaagctggaacagctcaat
aaggaaattgccgacctgaaggacgaagaaacgaaacagaaggctcagtggcaaagcgaa
aaagagcagatcaataagattcagcagaataagattgatatcgaaaacctgaagtttgaa
gccgataaggccgaacgtgaaggcgactacggtaaagtagccgaaatccgttacggaaag
atcaaacaaaaggaggaagagatcagggaagtccaggagaaactgaagacgatgcaaggt
gcttccgccatgatcaaggaggaagtggacagtgaagatatcgccgatgtggtatctcgt
tggacgggaattcctgtcagcaagatgatgcagagtgaaaaggaaaaattactccatctg
gaatctgaattgcacacgcgtgtgatcgggcaggaggaggccatcagtgctattgctgat
gcagtgcgtcgtagccgtgccggattacaggacccgaaacgaccgatcggttcatttatt
ttcctcggtacgacaggtgtcggtaagacagagctggccaaagcgttggcggaatatctg
ttcgacgacgagaatatgatgacgcgtatcgatatgagtgaatatcaggaaaagtttagt
gcgactcgtctgattggtgcgcctccgggatatgtcggctatgatgaaggtggccagttg
acggaagcaatccgccgtaaaccttattcggtcgttctatttgatgagatcgaaaaggct
catccggatgtattcaatatccttttgcaggtattggatgatggacggctgaccgacaat
aagggacgtgtcgtcaacttcaagaatacgatcattattatgaccagtaacatgggatcg
tccttgattcgtgaaaacttcgagaagatgacacccgaaacgcacgatcaggtagtggat
gaaacgaaggtccaggtgttggaattactgaagaagacaattcgcccagagttcctgaac
cgtatcgatgacatcatcatgtttactccgctcaacgaagaagagatccgcaagatcgtt
acccttcagttgaatagcgtgaagaagatgctggctcagaatggcatagccctggaattt
acagacgcggctctggcgtttatctcggacaaagggttcgacccgcagttcggtgcccgt
cctgtaaagcgtgtcatccagaagtatgtcttgaacgaattgtccaaagagttgctgggc
ggaacggtcaataaagatcgcccgattataatcgacagcgacggtagcggcctggtcttt
aagaactga
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