Parabacteroides merdae: INE87_00277
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Entry
INE87_00277 CDS
T07751
Symbol
topB_1
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmer03032
]
INE87_00277 (topB_1)
Enzymes [BR:
pmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
INE87_00277 (topB_1)
DNA replication proteins [BR:
pmer03032
]
Prokaryotic type
DNA Topoisomerases
INE87_00277 (topB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
QUT47858
LinkDB
All DBs
Position
complement(329094..331172)
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AA seq
692 aa
AA seq
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MKVCIAEKPSVAREIAEVLGATKKMNGYIEGNGYQVTWTFGHLCTLKEPNDYSENWKRWS
LASLPMIPPRFGIKLISNPTYEQQFKTIEELMQNAEMVINCGDAGQEGELIQRWVMQKAG
CKCPVYRLWISSLTEEAIREGFQHLKEQSDFTKLYEAGLSRAIGDWLLGMNATRLYTLRY
GQNRQVLSIGRVQTPTLALIVNRQAEIDNFKPEPYWELKTVYRNTTFSVTKGKFTKKEEG
EAFLEIVRQKEFTVTDISEKKGKEYAPRLFDLTSLQVECNKKFAFTADDTLKLIQSLYEK
KVTTYPRVDTTFLSDDIYPKVPNTLNGLVDYIDLTASLLKAKIRKDKRVFDNSKVTDHHA
IIPTGVPARNLTDNERKVYDLVVRRFIAAFYPDCEISTTTVLGKVDKVDFKVTGKQILKP
GWRVVFGAEQKDSDAEPSDEEGVLPDFIKGESGPHKPTLGEKWTQPPKPYTEATLLRAME
TAGKLVDNDELRDALKENGIGRPSTRAAIIETLFKRNYIRKERKNLFPTATGVELIDTIQ
EELLKSAELTGLWEKKLRQIERGTYEARTFLEELKLMVHQVVINVLSDQTGRTITIEQAA
PEKPQTEKEPKGEKTRKPRAKKEKTAGQPESTTVPVKPVCPICKKGSILRGKTAYGCSEY
KDGCTFRMDYATYGEGLSDEELVKVISGIRKD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtatgtatagctgaaaagcccagtgtagcacgcgaaattgcagaagttctcggg
gcaaccaaaaagatgaacgggtatattgaaggaaacgggtatcaggtaacctggactttc
ggacatctgtgcactctcaaagagcccaatgattattcagagaactggaaacgatggagt
ctagcttccctcccaatgatcccgcctcgattcgggatcaagctgatcagcaatccgaca
tacgaacagcaattcaaaacaatcgaagaactgatgcagaatgccgaaatggttatcaac
tgcggagatgccggccaggaaggagaactgatccagcgttgggtgatgcaaaaggctggc
tgtaaatgcccggtctaccgcctatggatatcttcgttgacagaagaagcgatccgcgaa
ggttttcaacatttgaaagaacagtccgacttcaccaagttatacgaagccggtctttcc
cgcgccatcggtgactggctgttaggaatgaacgcaacgcgcctttatacgctccgctac
ggacaaaatcggcaagtgctttccatcggacgagtacagacacctacccttgcactcatc
gtaaaccgacaagccgaaatagacaactttaagccggaaccttattgggaactgaaaaca
gtttaccgaaacactactttctcggttaccaaaggcaaattcacgaagaaagaggaaggg
gaagctttcctggaaatagtccggcaaaaagaattcaccgtcaccgacatatcagaaaag
aaagggaaggaatatgctccccgccttttcgacctgacttcgttgcaggtggaatgtaat
aagaaatttgctttcacggctgacgatacattgaagctgatccagtcgctatacgaaaag
aaagtgacaacctacccgcgtgtcgacaccactttcctaagtgacgatatctatcctaaa
gttcccaacacacttaacggcctggttgactatatcgacctgacagcctcgctgctgaag
gcgaaaatacggaaagacaaacgtgtattcgacaattcgaaggtgacggatcaccatgcc
atcatcccgaccggtgtaccagcacgcaacctaacggacaacgaacggaaggtgtacgac
ctggtggtccgccgtttcatcgcagctttttacccagactgcgaaatctcgactactacg
gtattgggtaaagtcgacaaagtagatttcaaggtaacaggcaaacagatattgaaaccg
ggatggcgcgttgtgttcggagcagagcagaaagactcggacgccgaaccgtcagatgaa
gaaggcgtactgccggatttcataaaaggagaaagtggcccccacaaaccgacattaggc
gaaaaatggacacagccgcccaaaccctacaccgaagcgacattgctccgcgccatggaa
acagccggtaaacttgtggacaatgacgaattgagagacgcattgaaggaaaacggtata
ggccgtccttccacccgcgccgccatcatcgagactttattcaaacgcaattatatccgc
aaggaacgcaagaacctgtttcctacagctaccggtgtggaactcatcgacacgatacag
gaagagctgctgaaaagcgccgaactgaccggtctttgggaaaagaaactacgacaaatc
gaacggggcacctacgaagcccgtacttttttggaagagcttaagctgatggtccatcaa
gtagtgatcaacgtcctctccgaccagaccggacgcaccatcacaatcgagcaggctgct
ccagagaagccccaaaccgaaaaggagccgaaaggggaaaaaacgcgcaaaccgcgtgcc
aagaaggaaaagactgccggtcaaccagaatcaacaaccgttcccgtaaagccggtatgc
ccgatctgtaagaaaggtagcatcctgcgtggaaaaacggcttacggctgttccgaatat
aaagatggttgtactttccgcatggattacgccacctatggcgaaggattgtcggatgag
gaattagtgaaggtgatcagtggaatcagaaaggattaa
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