Parabacteroides merdae: INE87_00350
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Entry
INE87_00350 CDS
T07751
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00300
Lysine biosynthesis
pmer00470
D-Amino acid metabolism
pmer01100
Metabolic pathways
pmer01110
Biosynthesis of secondary metabolites
pmer01120
Microbial metabolism in diverse environments
pmer01230
Biosynthesis of amino acids
Module
pmer_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
INE87_00350 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
INE87_00350 (dapF)
Enzymes [BR:
pmer01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
INE87_00350 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
QUT47930
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All DBs
Position
complement(398560..399384)
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AA seq
274 aa
AA seq
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MTEPIRFTKMHGAGNDYIYVNTMAFPVRNPEELAIRLSAPHTGIGSDGLVLIGSSKIADF
SMRIFNADGSEAMMCGNASRCIGKYVYDKRLTNKKNITLETLSGIKELQLTTRKLSGSHE
EVTEVTVDMGCPVIGETALEIEAGDYFYTGTVISMGNLHLVIFVEDITNINLPVIGPLLE
CHPLFPNRTNVEFVQALSTDEVRMKVWERGSGITQACGTGACATAVASAVRGKTGRKTKV
VMDGGPLTIHWDESSGHVYMTGGAVKVFEGELEI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccaatcagatttacaaagatgcacggagccggaaacgactacatatacgtg
aatacaatggcttttccggtccggaacccggaagagcttgccattaggttgagtgctccc
cataccgggatcggctcggacggactggttctgatcggttcatcaaaaatcgccgacttc
agcatgcgtattttcaatgcggacggttccgaagccatgatgtgtggaaatgcctcccgt
tgtatcggcaaatatgtatatgacaaaagactgacgaacaaaaaaaacattacgctggaa
acattatccggcatcaaggagttgcaactgaccacccggaaactttccggttcccacgaa
gaggtaaccgaagtgacggtcgacatgggctgtccggtaataggtgaaacagcccttgaa
atagaagccggagactatttttatacgggaacggtcatctcgatggggaatctgcatctt
gtcatttttgtcgaagatatcacgaatataaatctgccggtcatcggacctttattggaa
tgccatccgctgttcccaaaccggacgaatgtcgaatttgtccaggcgctaagtacagac
gaagtacggatgaaggtttgggaacgcggttccggcattacgcaagcctgtgggaccgga
gcctgtgcgacagccgtagcaagcgcagtgcgcgggaaaaccggacgaaaaaccaaagtc
gtcatggatggaggccctcttaccatccattgggatgaaagttccggacacgtctatatg
actggcggggcggtcaaagtattcgagggggaactggaaatataa
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