KEGG   Parabacteroides merdae: INE87_00350
Entry
INE87_00350       CDS       T07751                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pmer  Parabacteroides merdae
Pathway
pmer00300  Lysine biosynthesis
pmer00470  D-Amino acid metabolism
pmer01100  Metabolic pathways
pmer01110  Biosynthesis of secondary metabolites
pmer01120  Microbial metabolism in diverse environments
pmer01230  Biosynthesis of amino acids
Module
pmer_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmer00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    INE87_00350 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    INE87_00350 (dapF)
Enzymes [BR:pmer01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     INE87_00350 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: QUT47930
LinkDB
Position
complement(398560..399384)
AA seq 274 aa
MTEPIRFTKMHGAGNDYIYVNTMAFPVRNPEELAIRLSAPHTGIGSDGLVLIGSSKIADF
SMRIFNADGSEAMMCGNASRCIGKYVYDKRLTNKKNITLETLSGIKELQLTTRKLSGSHE
EVTEVTVDMGCPVIGETALEIEAGDYFYTGTVISMGNLHLVIFVEDITNINLPVIGPLLE
CHPLFPNRTNVEFVQALSTDEVRMKVWERGSGITQACGTGACATAVASAVRGKTGRKTKV
VMDGGPLTIHWDESSGHVYMTGGAVKVFEGELEI
NT seq 825 nt   +upstreamnt  +downstreamnt
atgacagaaccaatcagatttacaaagatgcacggagccggaaacgactacatatacgtg
aatacaatggcttttccggtccggaacccggaagagcttgccattaggttgagtgctccc
cataccgggatcggctcggacggactggttctgatcggttcatcaaaaatcgccgacttc
agcatgcgtattttcaatgcggacggttccgaagccatgatgtgtggaaatgcctcccgt
tgtatcggcaaatatgtatatgacaaaagactgacgaacaaaaaaaacattacgctggaa
acattatccggcatcaaggagttgcaactgaccacccggaaactttccggttcccacgaa
gaggtaaccgaagtgacggtcgacatgggctgtccggtaataggtgaaacagcccttgaa
atagaagccggagactatttttatacgggaacggtcatctcgatggggaatctgcatctt
gtcatttttgtcgaagatatcacgaatataaatctgccggtcatcggacctttattggaa
tgccatccgctgttcccaaaccggacgaatgtcgaatttgtccaggcgctaagtacagac
gaagtacggatgaaggtttgggaacgcggttccggcattacgcaagcctgtgggaccgga
gcctgtgcgacagccgtagcaagcgcagtgcgcgggaaaaccggacgaaaaaccaaagtc
gtcatggatggaggccctcttaccatccattgggatgaaagttccggacacgtctatatg
actggcggggcggtcaaagtattcgagggggaactggaaatataa

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