KEGG   Parabacteroides merdae: INE87_00507
Entry
INE87_00507       CDS       T07751                                 
Name
(GenBank) Exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pmer  Parabacteroides merdae
Pathway
pmer03030  DNA replication
pmer03430  Mismatch repair
pmer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    INE87_00507
   03430 Mismatch repair
    INE87_00507
   03440 Homologous recombination
    INE87_00507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmer03032]
    INE87_00507
   03400 DNA repair and recombination proteins [BR:pmer03400]
    INE87_00507
Enzymes [BR:pmer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     INE87_00507
DNA replication proteins [BR:pmer03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     INE87_00507
DNA repair and recombination proteins [BR:pmer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     INE87_00507
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like LemA
Other DBs
NCBI-ProteinID: QUT48087
LinkDB
Position
582510..583280
AA seq 256 aa
MQLNLKNPLVFFDLETTGINIVKDRIVEISFVKVYPNGKEESKTRRINPEMPIPPESTAI
HGITDEDVKDCPTFKEIAKSLAAQIEGCDLAGYNSNRFDIPLLAEEFLRAGVDIDLNKRK
FVDVQTIFHKMEQRTLAAAYKFYCDKSLENAHTAEADTMATYEVLKAQLDRYPELQNDIN
FLSQYSSYTNNVDFAGRMVYNDKGEEVINFGKYKGRLVEEVLKNDPGYYSWIMNGDFPLN
TKKILTEIKLRGFNSK
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcagttaaacctgaaaaatccgttagtcttcttcgacttggagacgacgggtattaat
attgtcaaagaccgtatcgtggaaatctcttttgtcaaggtttacccgaatggaaaagaa
gaatctaaaacgagacggatcaatccggaaatgcccattccaccggagtcgaccgctatt
cacggcatcaccgacgaagacgtaaaagactgtcctacctttaaagaaatagccaaatcg
ttggcagcccagatagaggggtgtgatttggcaggatataattccaatcgctttgatatc
cctttgttggcagaagaatttctgcgtgcaggtgtcgatatcgatttgaacaaacgcaag
tttgtagacgtacagaccatttttcataagatggaacagcgtacgcttgcggccgcttat
aagttctactgtgacaagagccttgaaaacgcccatacggcggaggccgatacgatggcg
acttatgaagtgttgaaagcgcagttggaccggtatccggagttgcagaatgacattaat
ttcctttcccaatattcgagctatacgaataatgtggactttgccggacgtatggtatat
aacgacaagggggaagaagtgataaacttcggtaaatataaaggccgtctggtagaggaa
gtgctgaagaacgatcccggatattattcctggataatgaatggcgacttccctctgaac
accaagaaaatactgactgagataaaattgagaggttttaattcgaaataa

DBGET integrated database retrieval system