Parabacteroides merdae: INE87_00831
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Entry
INE87_00831 CDS
T07751
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00730
Thiamine metabolism
pmer01100
Metabolic pathways
pmer01240
Biosynthesis of cofactors
Module
pmer_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
INE87_00831 (thiC)
Enzymes [BR:
pmer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
INE87_00831 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QUT48406
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Position
920394..922100
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AA seq
568 aa
AA seq
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MANKNRIRITYPSSEKIYIPGKIHKINVGMRKIKILDTVTRDENGELVHKKNNPVIVYDT
SGPYSDPKIPVNTQNGIPRIRESWYAGRKDLIRLEELTSDYGRQRLADSSLDHIRFPKHH
LPYRAKAGKNITQLYYAKRRIITPEMEYVAIRENQQIEALGLKSYITPEFVRKEIAAGRA
IIPANINHPEAEPMIIGRKFLVKINTNIGNSALSSGIDEEIEKAVWSCKWGGDTLMDLST
GDNIHETREWIIRNCPVPMGTVPIYQALEKVNGKIEDLSWKIYRDTLIEQAEQGVDYFTI
HAGLLKKHIELTQTRLTGIVSRGGSIMAKWMQIHNEENFLYTHFAEICEILKMYDIAVSI
GDGLRPGSIYDANDAAQFAELHTMGELTQVAWDQFVQVIIEGPGHVPMNKIQENMKEQQY
ACHNAPFYTLGPLTTDIAPGYDHITSAIGAAQIAWHGTAMICYVTPKEHLGLPDKEDVRT
GVVTYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWKDQFNLSFDPERALQYYKDSAVT
DGEYCTMCGPNFCAMRLSKDLHKENCDI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaaacagaatacgtatcacgtatccttcatcggaaaagatctacataccc
ggcaagatacataagataaatgtgggtatgcgaaagatcaaaatactggataccgtcaca
cgcgatgagaacggagagttggtccacaaaaaaaacaatcccgtcatcgtgtatgatacc
agtggaccttattcggacccgaaaatcccggtcaatacgcaaaacggcattccccgtatc
cgcgaatcctggtatgcaggacgcaaagacttgatccgcctggaagaactgacttccgat
tatggccggcagcgcctcgctgattcctcactggatcacatccgtttcccaaaacatcat
ctaccctatcgtgccaaagcggggaaaaacatcacccaactgtattatgcgaaacggcgc
atcatcactccggaaatggaatatgtcgccatccgcgaaaaccagcagatcgaggcgtta
ggattgaaatcatatatcactcccgaatttgtccgcaaagaaattgccgccgggcgtgcc
atcatcccagcaaacatcaaccaccccgaagcagaaccgatgattatcggccggaaattc
ttagtgaagatcaacaccaatatcggcaactccgccctttcgtccggtatagacgaagag
atcgaaaaggctgtatggagctgcaaatggggaggcgacaccttgatggatctttcgaca
ggagacaatatccatgaaacccgcgaatggatcattcgtaactgtccggttccgatggga
acagtccctatctaccaggctttggaaaaggtgaacggaaagatagaagacttgagttgg
aaaatctatcgcgacacactgatcgaacaggctgaacagggagtcgactatttcaccatc
catgccggtttgcttaaaaagcatatcgaactgacacaaacgcgcttgacaggtatcgtc
tcacgcggaggctcaatcatggctaagtggatgcaaatccataatgaagagaatttcttg
tatacacatttcgccgaaatatgcgagatattgaaaatgtacgatatcgccgtttcgatc
ggcgacgggcttcgcccgggctccatctacgatgcgaacgatgccgcccaatttgccgaa
ctacatacgatgggggagttaacccaggttgcctgggaccagtttgtacaggtcatcatc
gaaggtccgggccatgtcccgatgaataagatccaagagaacatgaaagaacagcaatat
gcttgccataatgccccgttctacacgttaggcccgctaacaacagatatcgccccaggt
tacgaccatatcacatcggctatcggagccgcccagattgcctggcacggcacagcaatg
atctgttacgtcactccgaaagaacatctcggtttaccggataaggaagatgtccgcacg
ggtgtcgtcacctataagatcgccgcccacgccgccgacctggcaaagggacatcccgga
gcacaagtccgtgacaatgctctgagcaaagcccgcttcgaattccgctggaaagaccag
ttcaacctgtctttcgatccggaacgcgcccttcaatattacaaggacagtgccgtgacg
gacggtgaatattgcacgatgtgcggccccaacttctgtgccatgcggctgagcaaggat
ttacataaagaaaactgcgatatataa
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