Parabacteroides merdae: INE87_00887
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Entry
INE87_00887 CDS
T07751
Name
(GenBank) TonB dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmer02000
]
INE87_00887
Transporters [BR:
pmer02000
]
Other transporters
Pores ion channels [TC:
1
]
INE87_00887
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QUT48461
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All DBs
Position
complement(990891..992861)
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AA seq
656 aa
AA seq
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MMLGICPLWVYAQSRLDSIQHLDEITVVAKSFREVIPSQKLSGKELQKLNSHSVADALRY
FSGVQLKDYGGVGGIKTVNIRSMGTNHMGVFYDGIELSNAQNGQVDLGMYSLDNIEEISL
YNGQKSEIFQSAKDFGAAGTLYLRSRRPKFEDGKNTNLRATMKAGSFDVINPSALFEYKI
SENVAASFSAEWLNASGKYKFRYRRVNPAGEIAYDTTAVRENGDINATRLEAGLYGTIER
GTWNAKVYNYNSERGIPGAIVNNVWRRGERVWDTNSFFQGSFVKEVNDQFKTQVNAKYAF
YRTHYVNNDDKLIEVDNLYKQREVYVSTANMYTIFPFWDVSMSYDFQWNEMKADMYGFVF
PTRFTNLLSIATALRLGKVKLQGSGLATFVNDRVKEGPAPKARQILTPAVFLSYKPFDKH
DFSLRAFYKKTFRMPTFNDLYYADMGNSKLDPEYVTQYNLGTVYQKQWGNKLFRHFKIQA
DGYYNYVKDKIIAYPKGQQFRWTMLNLGKVKIRGVDISTETMINPWKDLFITMKVQYTYQ
KAQDYTDPSDNYYKDQIPYIPWHSGSAIAQASYKGWDLNYSFIYVGERYNQQENIKYNYT
QPWYTSDISLSKEFKMKFGSLKASLEVNNLLSQDYDVILNYPMPKRNYRASLTVEL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagggatatgccctctatgggtgtatgcccaaagtagattggattccatccaa
catttggatgaaataaccgttgtggctaaaagtttcagggaagtcataccttctcaaaaa
ttgtcaggcaaagaacttcaaaaattgaacagtcacagtgtcgcagatgcccttcgttat
ttttccggggtacaattgaaagactatggaggtgtaggcggtataaaaacagtgaatatc
cgtagcatgggaacgaatcatatgggggtattttacgatggaatagaattgagcaacgct
cagaacgggcaggtcgatttgggcatgtattcgttggacaatatcgaggaaatttctctg
tataacggacagaaaagcgagatattccagtccgccaaggattttggtgcggcagggacg
ctctatcttaggtcacgcagacctaaatttgaggacggaaaaaacacgaatttaagggca
accatgaaagccggatcttttgatgtgatcaatccttcggctctttttgaatataaaata
tccgagaatgtagccgcctcgttcagtgcagaatggctgaatgccagcggaaaatacaag
ttccgttaccgtcgtgtcaatccggccggagagatcgcatacgatacgaccgccgtgcgg
gaaaacggggatatcaacgcaacccgcttggaagcgggattgtatggaacaatcgaaaga
ggaacctggaacgcaaaagtttataattataattctgaacgtggtatccccggcgctatt
gtcaataacgtgtggcgtcgcggagaacgggtctgggataccaattccttttttcagggc
tcttttgtaaaagaggtgaacgatcaattcaaaacacaggttaacgcaaaatacgctttt
tatcgtacacactatgtaaataatgacgataaactgatcgaggtggataatctttataaa
caacgtgaggtttatgtttctacagccaatatgtacacgattttcccattctgggacgtt
tccatgtcatacgattttcaatggaatgagatgaaagcggatatgtacggttttgtattc
cccacccgttttaccaacctgctgtcgatcgcaacggctcttcgcctgggaaaagtaaag
ttgcagggaagcggtttggcgacgtttgtgaacgaccgggtcaaagaagggccagccccc
aaagcccggcaaatacttactcctgctgtttttctttcatataagccatttgataaacat
gattttagtctacgagcattctataaaaaaacattcaggatgcccacttttaatgacctg
tattatgctgatatgggaaactccaagctggatcccgaatatgtcacgcaatataatcta
ggaaccgtataccaaaaacagtgggggaataaattatttcgccattttaagatacaagcg
gacggctattataattatgtgaaggacaagataatcgcttatccgaagggacaacaattc
cgttggacgatgttaaatttggggaaagtgaaaatacgaggtgttgatataagtacagaa
acgatgattaatccttggaaagacttgttcattaccatgaaagtacaatacacctatcaa
aaggcgcaagattataccgatccttccgataattattataaagaccagatcccttatata
ccctggcatagcggatctgctatcgcccaagcttcttacaaaggctgggacttgaattac
agctttatttatgtgggggaacgctataaccaacaggaaaatatcaaatacaactataca
caaccttggtataccagtgatatttccttgtctaaagaattcaaaatgaaatttggttca
ctgaaagcatctttggaggtcaacaacttgttgagtcaagattatgatgttattttgaat
tatcctatgcccaagcgaaattatcgggcgtctttaacggtcgaattataa
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