Parabacteroides merdae: INE87_01138
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Entry
INE87_01138 CDS
T07751
Name
(GenBank) Putative beta-glucuronidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00052
Galactose metabolism
pmer00511
Other glycan degradation
pmer00600
Sphingolipid metabolism
pmer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
INE87_01138
09103 Lipid metabolism
00600 Sphingolipid metabolism
INE87_01138
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
INE87_01138
Enzymes [BR:
pmer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
INE87_01138
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2
Glyco_hydro2_C5
Glyco_hydro_2_N
Glyco_hydro_42
Glyco_hydro_2_N2
TcaA_3rd_4th
Motif
Other DBs
NCBI-ProteinID:
QUT48709
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Position
complement(1277779..1280259)
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AA seq
826 aa
AA seq
DB search
MKYLFVACLLCLSVLSAVAKVPAMNKIRLTNNWEYLKGDLGGIWEAVRPAAPGSSEAVPI
WQPVTLPHCFNAEDAVDPDVNYYEGPGWYKTLLAIDNPYRNGRIVLDFDGAGQKTDVYVY
TTHVGSHVGGYDSWNVDITDAVKAFLGSKDAKRFKGKVPLSIRCDNSRDLEMIPSDLADF
NIYGGLYRYLNLVYLPEVSFEQIRLESSLSSNLKEGILKVKTSFYNPEDIRKADVTVSVY
DADRKPVFSKTLEGILPLGDQLLAEMKIKNPVLWDVDVPQLYTCELTVKTPDQTFTTEER
FGFRHTEFKDKGPFFLNGKRLLLRGTHRHEDHAGVAQAMTEDMMRREMRMMKDMGVNFIR
LGHYQQSEIILDLCDELGILVWEEIPWCRGGLGGDVYKKQARRMLANMIVQHHNHPAVII
WGLGNENDWPNDFNTFDKSAIRAFMKELHDMAHRLDDTRMTAIRRCEFCNDIVDVYSPSI
WAGWYRGVFTDYKSISEQEMQKVKHFLHVEWGGDSHARRHSEDAFYNLKNIEAGKGGDER
AGDASLYGGVPRASRDGDWSESYVVRLIDWHLKEQETMPWLTGTAYWPFKDFSTPVRPDN
PVPYVNQKGVVERDFTPKESYYVFQSYWTEKPMIHIYGHTWPVRWGGKDDRKEILVYSNC
DEVELFVNGVSQGVKRRNSQDYPAAGLRWNCVYREGMNEIRAVGVKKKEKKEVSDVIRQE
YQTAKWDKEAACQVSLLSEEGDTALVQVQLIDKNGIRCLSSKKQITFEIAGDGSLICNLG
TSTGSRKVQAYNGRALIRIKRNEGNSVVAVKSEGLPTAFLELKSPK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacttgtttgttgcatgcttattgtgtttgtccgttctgtcggctgtggcgaaa
gtgcctgctatgaataagattcggctgacgaacaattgggaatatctgaaaggtgatttg
gggggaatctgggaggctgtacgtcctgccgcacccggcagttcggaggcggttcctatc
tggcagcctgttacgttacctcattgttttaatgccgaagatgctgttgatccggacgtg
aattattatgaaggtccgggatggtataaaactttgttggcgatagacaatccctatcgg
aacgggcggatcgtactcgatttcgacggggcgggacagaagacggatgtctatgtctat
acgactcatgtcggtagccatgttggcggttatgacagttggaatgtcgatattacggat
gcggtaaaagcatttctcggcagtaaagatgcgaaacgtttcaaagggaaagtacctttg
tcgatccgttgcgataattcacgtgatctggaaatgataccatccgatctggctgatttc
aatatctatggtggtctgtaccggtatttgaacttggtgtacctgcctgaagtttctttt
gaacagattcgtttggaatcttccctctcttctaacttgaaagagggtatattgaaggtg
aaaacttcgttttataatccggaagatataaggaaggcggatgtgaccgtttccgtttac
gatgcggaccgtaaaccagtcttctcgaaaacactggaaggaatacttcctttgggtgac
cagcttttagcagagatgaagatcaagaatccggtattgtgggacgtggatgtgccacaa
ctctatacttgcgagttgactgtaaagacaccggatcagactttcacgacggaagaacgc
ttcggtttccgccatacggagtttaaggacaaaggtccattcttcctgaacggcaaacgt
ttgctgttgcgaggtacgcatcgccatgaggatcacgctggtgtggcacaagccatgacg
gaagatatgatgcgtcgtgaaatgcggatgatgaaagatatgggcgtgaactttatccgt
ttaggacattaccaacaatctgaaatcattctggacctttgcgacgaattgggcattctg
gtatgggaagaaattccttggtgtcggggcggtcttggaggcgatgtctacaaaaaacaa
gcccgtcggatgcttgctaatatgatcgtccagcatcataatcatccggctgtcatcatc
tgggggttgggtaatgagaatgactggcctaacgatttcaatacgttcgacaagagtgcg
atccgtgctttcatgaaagagttgcacgacatggcgcaccgtttagacgacacacgtatg
acggcgatccgccggtgtgaattttgtaatgatattgttgatgtctattcaccttcaatc
tgggctggttggtatcggggtgtctttaccgattataaatcgatctcagaacaggagatg
cagaaggtaaaacacttcctgcatgtagagtggggaggtgacagccatgcccgtcgtcat
tcggaagatgctttttataatctgaagaacatcgaggcaggaaagggcggtgatgaacgt
gccggcgatgcttccttgtatggtggcgttccacgtgcttcgcgcgatggcgattggtcg
gaaagttatgtggtccgtctgatcgactggcatctgaaagagcaggagacgatgccgtgg
ctgaccggtacagcctactggccttttaaagatttttcgactccggtccgtcccgacaat
cctgtcccttatgtcaatcagaagggggtggttgaacgcgattttactccgaaagaaagc
tactatgtgttccagtcttactggacggagaagccgatgatccatatctacggtcatacc
tggccggttcgctggggtggaaaagatgaccgcaaggaaatcttggtatattctaactgc
gacgaagtggagctttttgtcaatggtgtgagccagggtgtgaaacggcgtaatagtcag
gattatccggctgccgggttgcgctggaattgtgtttatcgggaaggcatgaacgaaata
cgggctgtcggtgtaaagaaaaaggagaagaaggaggtttctgatgtcattcgtcaggaa
taccagactgctaaatgggataaagaagccgcttgccaagtgagcttgctttccgaagag
ggagatacggctttggtacaggtacaactgatcgataaaaacggcatccgttgtctcagc
tccaaaaagcagattacgtttgagattgccggagatggcagcctgatctgcaatttagga
acttcgaccggtagtcgtaaagtacaggcgtataatggtcgtgccctgatccgtatcaaa
cggaacgagggtaatagcgtggttgctgttaaatcggaaggcctgccgactgcattcctg
gaattgaagagtcccaagtag
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