Parabacteroides merdae: INE87_01179
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Entry
INE87_01179 CDS
T07751
Symbol
nfo
Name
(GenBank) Endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
INE87_01179 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmer03400
]
INE87_01179 (nfo)
Enzymes [BR:
pmer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
INE87_01179 (nfo)
DNA repair and recombination proteins [BR:
pmer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
INE87_01179 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
30K_MP_core
HpaB_N
Motif
Other DBs
NCBI-ProteinID:
QUT48748
LinkDB
All DBs
Position
complement(1334445..1335281)
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AA seq
278 aa
AA seq
DB search
MKYIGAHVSASGGVENAPVNANAIGAKAFALFTRNQRQWKSSPLTKKSISLFRERCEEFG
YAAEYILPHDSYLINLGHPEAEGLQKSRDAFLDEMQRCEQLGLNRLNFHPGSHLNQMEVE
DCLTRIANSVNWALDQTSGVCAVLENTAGQGTNLGYTFEQLAYIIDKVEDKSRVGVCIDT
AHTLAAGYDIKTVEGFTETFRHFDEVIGFSYLRGMHINDSKKDLATRVDRHDSIGKGVMG
LTTFKMLMDDPRFDNIPLILETPDESIWSEEIEYLYSI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatattggagcacatgtgtcggcatcgggtggagttgagaatgctccagtgaat
gcgaatgcgattggggcgaaggcatttgctttgtttacccgtaatcagcgtcaatggaaa
tcttctccgctgacaaaaaagagtatttctcttttcagagagcgttgtgaggaatttggt
tatgcggcagaatatattcttccgcatgacagttatctgatcaatctgggacatccggaa
gcagaaggtttgcagaagtcacgggatgctttcttggatgaaatgcaacgttgtgagcag
ctgggattgaatcgtttgaatttccatcctggaagtcatttgaaccagatggaggtggag
gactgtctgacgcgcatagctaattcggttaattgggcattggatcagacttcgggtgta
tgtgccgtattagaaaatacagccggacagggaaccaatctgggatatacttttgagcaa
cttgcttacattatcgataaagtggaagataaatcccgtgtcggagtttgtatagatact
gctcatacattggctgcgggttatgatatcaagactgtcgaaggttttacggagacattc
cgacattttgacgaggtaataggtttttcttatttgcgtggcatgcatataaacgattcc
aaaaaagatctggctacccgtgtggatcgccatgatagtattgggaaaggagtgatggga
ttgactacatttaagatgctgatggatgatccccggtttgataacattcctttaattctg
gaaacaccggatgagtctatttggtcggaagaaatagaatatctgtattctatataa
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