Parabacteroides merdae: INE87_01331
Help
Entry
INE87_01331 CDS
T07751
Symbol
rpoE_2
Name
(GenBank) ECF RNA polymerase sigma-E factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmer
Parabacteroides merdae
Pathway
pmer02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
INE87_01331 (rpoE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmer03021
]
INE87_01331 (rpoE_2)
Transcription machinery [BR:
pmer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INE87_01331 (rpoE_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_28
DUF722
HTH_Tnp_ISL3
HTH_38
SWIRM
HTH_40
PF0610-like_N
PhyR_sigma-like
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QUT48897
LinkDB
All DBs
Position
complement(1512264..1512806)
Genome browser
AA seq
180 aa
AA seq
DB search
MEERELILLLKQGSKDAFTALYKQYWKQVYNFSRLYLTSADAAEEVVQEVFIKIWETREF
LREDDHFKGLLFIITRNLIFNRHRKNVNEDFYKVTVLAALEEPYDVEEEIDAHNLQEYID
RLIDELPPRRREIFNLSRKEQKSYKEIAILLNISEKTVENQISEALKYLKKNITLLLLFI
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcgggaactgatattattgttgaagcagggtagcaaagacgcatttactgct
ctgtataaacaatactggaaacaggtctataatttcagtcgtctctatttgaccagtgcc
gatgctgccgaagaagtagtacaggaagtctttatcaaaatatgggaaacgcgtgaattt
cttcgtgaagatgaccattttaaaggtttgctgtttattatcacccggaatctgatcttt
aaccggcatcgcaaaaatgtgaatgaagatttctacaaagtcacggttcttgccgcattg
gaagaaccgtatgatgtggaagaagaaattgatgctcataatctccaagaatatatagat
cgcctgatcgatgaattgccaccgcgccgccgtgagatttttaacttgagccgtaaggaa
caaaagagctacaaagaaatagctatcctattgaatatttcagagaaaacggtcgaaaat
caaatcagcgaagccctcaagtacttgaagaagaatatcacactgcttcttctctttatc
tga
DBGET
integrated database retrieval system
