Parabacteroides merdae: INE87_01406
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Entry
INE87_01406 CDS
T07751
Symbol
rlhA_1
Name
(GenBank) 23S rRNA 5-hydroxycytidine synthase
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmer01002
]
INE87_01406 (rlhA_1)
Peptidases and inhibitors [BR:
pmer01002
]
Peptidases of unknown catalytic type
Family U32
INE87_01406 (rlhA_1)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
Motif
Other DBs
NCBI-ProteinID:
QUT48968
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Position
complement(1608730..1610559)
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AA seq
609 aa
AA seq
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MQTKSRPIELLSPAKDLNCGIEAINHGADAVYIGAPKFGARAAAGNSLEDIRELCEYAHL
YEARIYVTLNTILKEDELEEAERMIWDLWRVGTDALIIQDMGITRLNLPPIPLHASTQTD
NRTPEKVRFLEAVGFTQVVLARELSLNEIRRISEATTVPLEVFVHGALCVSYSGQCYLSA
ALSGRSANRGECAQYCRLPYTMVDATGTEIVTHKHLLSLKDMNRSDQLEALLDAGVSSLK
IEGRLKDAGYVKNITAYYRKKLDAVLSRRPEYRRASAGRSTYTFEPVAEKSFNRGFTPFL
LEGRTVDITAFNTPKSLGEPVGMVKEIKGNSFTVAGLKQLSNGDGLVFFNRKGELEGFRV
NRVEANRVFPLDMPQLAPKTPLYRNFDQAFDKLLAKPSAERKLSVEIEFLDNPFGFTLCM
EDETGARIMLTEPFAKELARREQQDNIRTQLSKLGNTPFEASKVVVGLSENWFVPSSLLA
DMRRRGVEKLLEARRARYPRETVKRVQPSVSIPFPERQLTYLGNVANGKARSFYQDHGVE
QIDPAFELSPRKDVPLMFTKHCLRYSMGWCPTYQKDKSPYKEPYYLLYKDTRLRLQFDCK
HCQMLVFES
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgaaatcccgtcctatagaacttctctctccggctaaagacctcaattgcggg
attgaagcgattaatcacggtgccgatgccgtctatatcggtgcacccaagttcggtgcg
cgtgctgctgccggcaactcattggaagatatacgcgagctttgcgagtatgcccacctg
tatgaagcccgtatctacgttacgctcaacacgatcctgaaagaagatgagttggaagaa
gccgaacggatgatctgggatctctggcgtgtcgggacggatgccctgatcattcaggat
atggggattacccggctgaacctgcctcctattccgcttcacgccagcacgcagacggac
aatcgtacaccggaaaaggtccgtttcctcgaagccgtaggctttacacaggtggttctg
gcacgtgaattgtcgctgaacgagattcgccggatatcggaagcgactaccgttccgctg
gaagtattcgtgcacggcgccctctgtgtcagctatagcgggcaatgttatctgagcgcc
gctttgagtggacgtagtgctaaccgcggagaatgcgcccaatattgccgcctgccctat
acgatggttgatgcgacagggacggagatcgtcacccataaacacttgctttcgctcaag
gacatgaaccgctccgaccagctggaagccctgttggatgcaggtgtttcttccctcaag
atcgaagggcggttgaaagatgccggctatgtcaagaatatcacggcttattatcggaag
aagttagatgcagtcctgtcccgccgtccggaatatcgtcgtgcttctgctggacgaagc
acttatacgttcgagccggtagctgaaaagagttttaaccgtgggttcaccccgttcctt
ttggagggacggacggtggatattaccgcttttaatacacctaagtcgttgggcgaacct
gtcggaatggtcaaggagatcaaaggcaattcctttactgtggccggcttgaagcagctg
agcaacggagatgggcttgtttttttcaataggaaaggcgagttggagggctttcgcgta
aacagggtggaggcaaaccgggtgtttccgctggatatgccgcagcttgcccccaagact
ccgctttaccgcaatttcgaccaggcgtttgataaactgctagccaagccttcagccgaa
cgtaagctgtccgtggagatcgagttcttggacaatcccttcggttttacgctttgtatg
gaggatgagacgggagcacggatcatgctgaccgagccgtttgcaaaagagctggcgcgt
cgtgaacagcaggataatatacggacacagctatccaagttggggaatacgcctttcgag
gcatcgaaggtggtggtcggtttgtctgaaaactggttcgttccctcttctctgcttgcc
gatatgcgccgtagaggagtggagaagttgctggaagcacgccgtgcccgctatccccgt
gagacagtgaaacgtgtgcagccgtccgtgtcgatacctttccccgaacgccaacttact
tatttggggaatgttgccaacgggaaagcccgttcgttctaccaggatcacggggtggaa
cagatcgacccggcatttgaactgtctccccggaaagatgttccgttgatgtttaccaaa
cactgcctgcgctacagcatggggtggtgtcctacttatcagaaagacaagtctccctac
aaggaaccgtattatctgctttataaagatacgcgcctccggttgcagttcgactgcaag
cattgtcagatgttggtatttgaaagttga
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