Parabacteroides merdae: INE87_01582
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Entry
INE87_01582 CDS
T07751
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmer03016
]
INE87_01582 (truA)
Enzymes [BR:
pmer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
INE87_01582 (truA)
Transfer RNA biogenesis [BR:
pmer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
INE87_01582 (truA)
Prokaryotic type
INE87_01582 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QUT49136
LinkDB
All DBs
Position
complement(1809292..1810167)
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AA seq
291 aa
AA seq
DB search
MKIYVCKITLFCLYRQSLGEISVTFAAEIKHKQGYPDMNRYFIYLGYNGKKFCGWQIQPN
GITVQQSIEEALATLLRQPVPIVGAGRTDAGVHARLMVAHFDWQEPIADLAFLAEKLNRL
LPKDIAVYRIVPVRPDAHARFDAISRTYKYYVTTRKDPFNYELVYKIPGKLDFEAMNKAC
PVLFDYIDFTSFSKLHTDVKTNNCRIYKAGWEREGDVWVFTIQADRFLRNMVRAIVGTLL
EVGRGKLTVDGFRQVIEAKDRGRAGTSAPGYALYLVDVTYPEELFQLAVGC
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatttatgtttgcaaaattacacttttctgcctgtatagacaatcccttggcgag
atttctgttacctttgcagccgaaatcaaacataagcaaggatatccggacatgaacaga
tactttatatatttaggttataacggtaaaaagttttgtggctggcagatacagccgaat
ggaatcactgtgcagcaatctatcgaggaagctttggctacgttgttgcgccaaccggtt
ccgatcgtgggagcggggcggacggatgctggtgtgcatgcccgcctgatggtggctcat
ttcgactggcaggaaccgattgctgacctcgctttcttagcggagaagctgaaccgtttg
cttcccaaagatatcgcggtctaccgtattgtacctgtacgtcccgatgcgcatgcccgg
tttgatgctatttcgcgtacctataaatattatgtcacgacgcggaaagatccgttcaat
tacgagttggtctataagattccgggaaaactcgatttcgaagcgatgaataaggcttgc
ccagttctgtttgactacatagatttcaccagtttcagcaagctgcatacggacgtgaag
acgaacaactgtcgcatctataaggctggttgggagagggaaggcgatgtatgggttttt
accatacaggcggaccgtttcctgcgcaatatggtgcgtgccattgtcggtactttactc
gaagtgggcagaggaaaactgacggtcgacggtttccgccaggtgatcgaagccaaagac
cgtggacgtgccgggacttccgctcccggatacgctctctatctggtcgacgttacttat
cccgaagaactttttcagttggcagtcggctgttga
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