Parabacteroides merdae: INE87_01979
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Entry
INE87_01979 CDS
T07751
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00900
Terpenoid backbone biosynthesis
pmer01100
Metabolic pathways
pmer01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
INE87_01979
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmer01006
]
INE87_01979
Enzymes [BR:
pmer01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
INE87_01979
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
INE87_01979
2.5.1.29 geranylgeranyl diphosphate synthase
INE87_01979
Prenyltransferases [BR:
pmer01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
INE87_01979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QUT49512
LinkDB
All DBs
Position
2302858..2303832
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AA seq
324 aa
AA seq
DB search
MFAFNDILQKIEQEITRLQFTYPPKSLYDPIEYILSLGGKRIRPALVLMACNLYKENVDT
AVNPALGLEVFHNFTLLHDDLMDDADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGE
TESESLKEILDLFTRTALEICGGQQYDMEFESRTDVTEEEYIEMIRLKTAVLLACALKMG
AIMGNAPKADAETLYQFGINIGLAFQLQDDLLDVYGDTATFGKNIGGDILCNKKTFMLIN
ALRLASNTQKAELNSWIGKKTFDPAEKIAAVTAIYDQLRLKELSEEKIHAYYNQAMNCLT
SLNVAPERLNILKKVSARLMNRQS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctttcaatgacatcctacagaaaatagagcaggaaattacccggctccaattc
acctatccgcccaaaagcttatacgacccgatcgagtacatactttcactcggtggaaaa
agaatccgtccggcactcgtactgatggcatgtaacttatataaggaaaacgtagataca
gccgtcaatccggcgttagggcttgaagtattccataacttcacccttttgcacgacgac
ctgatggacgatgccgataaaagaagaaacaaaccgaccgtccataaagtatggaatgcc
aacacagccatcctatccggcgatgccatgctgatcgcagcctatcaactgatcggcgaa
acagaatccgaatcattaaaagaaatattagacctgtttacccgtacggcgcttgaaata
tgcggcgggcagcagtacgacatggagttcgaatcgagaaccgatgtaacagaagaggaa
tatatcgaaatgatccgactgaaaacggccgtattgctagcctgtgccctgaagatggga
gctatcatggggaacgctccgaaagccgatgctgaaacgctgtatcagttcggcatcaac
atcggactggccttccaattgcaggatgacctgttggatgtctacggagacacggccacc
ttcggcaaaaatattggaggagacatactctgcaacaaaaagacattcatgctgatcaac
gctttacgccttgcttcaaatactcaaaaagcggaactgaacagctggataggtaaaaag
acattcgatccggcagagaaaatcgccgccgtaacagccatctatgaccaattgcggtta
aaagagttgtccgaagaaaaaatacacgcatattataatcaggcaatgaactgtctaacc
tcattaaacgtagctcccgaaaggctaaacatactgaaaaaagtcagcgcccgtttaatg
aaccgccagtcttaa
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