KEGG   Parabacteroides merdae: INE87_02023
Entry
INE87_02023       CDS       T07751                                 
Symbol
hsdR
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pmer  Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:pmer00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmer02048]
    INE87_02023 (hsdR)
Enzymes [BR:pmer01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     INE87_02023 (hsdR)
Prokaryotic defense system [BR:pmer02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   INE87_02023 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C T1R_D3-like ResIII HSDR_N SNF2-rel_dom
Other DBs
NCBI-ProteinID: QUT49551
LinkDB
Position
complement(2343325..2346144)
AA seq 939 aa
MAVQSEAALENALIHALEQMSYEYVKIEEESNLRDNFKCQLEKHNRKQLAEIGREHFTES
EFEKILLHLEGGSRFEKSKKLRDLYPLETENGERVWVEFLNKKQWCQNEFQVSNQITIEG
RKKCRYDVTILVNGLPLVQIELKKRGMELRQAYDQVQRYHKTSFHGLFDYIQVFVISNGV
NTRYFANNPNQGYKFTFNWTDKDNNPFNDLSLFAAMFFDKCTLGKMISKYIVLHEGDKCL
MVLRPYQFYAVEEILDKVQNSTDNGFIWHTTGAGKTLTSFKAAQLVSELDGVDKVMFVVD
RHDLDTQTQSEYEAFEPGAVDSTDNTDELTKKLSSDSKIIITTIQKLNAAVTKQWYSKRL
DEVRKSRIIMIFDECHRSHFGESHKNIVNFFTNTQIFGFTGTPIFKENSKNDRTTEEIFD
KCLHKYLIKDAIADENVLGFLVEYYHGNEEVSPGQESRMHEIAKFILNNFSKSTFDSEFD
ALFAVQNVPMLIRYYKIFKELNPKISIGAIFTYSSNPNEDDELTGMNSGFVSESVPEADD
MQEIINDYNQMFGTNFSIENFRAYYDDVNLRLKKKKTDMKPLDLCLVVGMFLTGFDSKKL
NTLYVDKNLEYHGLLQAFSRTNRVFNERKRFGKIVCFRDLKSNVDESIKLFSNGGTGTII
REAFEVVKKEYADIAKDFLAKYPDTAAVDALKTEPEKRDFILAFRELIKKHAEIQIYEDY
SEDDPELGISEQQYNDFRSKYLDIHDTFLDSTTVGGTSIEDNSTEDEIGLEDIDFCLELL
HSDIINVAYILELIAELNPFSENYEEQRRHIIDTMIKDAELRSKSQLIDGFIRQNVDEDK
EGFVERKKKADGSVDLEERLNQYIRQEKGKAIDRLAEDEQLPTELLNRFLSEYDFSQKVQ
PEIIQTAVKEKHLGLLKTRRTVNRILDRLRNIIRTFSWD
NT seq 2820 nt   +upstreamnt  +downstreamnt
atggctgtacaaagtgaagccgcacttgaaaatgctctgattcatgctcttgaacaaatg
agctatgaatacgtgaagattgaagaagaaagcaatcttcgcgataatttcaaatgccag
ctcgaaaaacataatcgcaaacaacttgcggaaatagggcgtgaacatttcaccgaatcg
gagtttgaaaagattttgcttcatttggagggcggctcacgctttgaaaaatccaagaaa
ctgcgcgacctctatccactcgaaaccgaaaatggggaacgtgtgtgggtggaatttctc
aataagaaacaatggtgtcagaatgagtttcaggtatcaaaccaaatcaccattgagggc
aggaagaaatgccgctatgatgtgacgatattggtaaatggtttgccgttggtgcaaatc
gaattaaaaaagcgagggatggaactgcgccaagcctacgaccaagtgcaacgctaccat
aagacatcgtttcatggcttgttcgactatatacaggtttttgttatttccaacggtgta
aacacccgctatttcgccaacaaccctaatcaaggctacaagtttactttcaattggacg
gataaggataacaaccccttcaacgacctcagtctgtttgcagcaatgttcttcgataaa
tgtacccttggtaagatgattagcaaatacatcgtgcttcatgagggtgacaaatgtctg
atggtgttgcgcccctatcagttctatgccgtggaggagattttggataaggtgcagaac
tctaccgacaatggcttcatttggcacactacgggagctggcaagactcttacttctttt
aaggcggcacaactcgtttcggagttggatggcgtggataaggtgatgtttgtggtggac
cgtcacgaccttgacacgcagacgcaatcggaatatgaagcgttcgaacccggtgcagtg
gatagcacggacaacaccgatgaactgacgaagaaactttcaagcgattcgaaaatcatt
atcactaccattcagaaactcaatgcagccgttacgaagcaatggtacagcaagcgtttg
gatgaagtgaggaagtcgcgcatcatcatgattttcgatgagtgtcatcgtagccatttc
ggtgagagccacaaaaatattgtcaacttctttaccaatacgcaaatattcggcttcacg
gggacacctatattcaaggagaactctaagaacgatcgtactaccgaagaaatcttcgac
aagtgtctgcacaagtatctgattaaagatgccattgctgatgagaatgtacttggcttt
ttggtggaatactaccacggcaacgaggaggtatcaccgggacaggaaagccgtatgcac
gagattgccaaattcattctcaacaatttcagcaaatccacctttgacagtgagtttgac
gcgctatttgccgtgcagaatgtgccgatgctcattcgttactataagattttcaaggaa
ctgaatcctaaaatctcaatcggtgcaatcttcacctattcatctaaccctaacgaggac
gatgaactgacgggcatgaacagcggttttgtcagcgaatccgtgccggaggctgacgat
atgcaggaaatcatcaacgactacaaccaaatgttcggtacgaatttctccatcgagaat
ttccgtgcttactacgatgatgtcaatctgcggttgaaaaagaagaaaaccgacatgaaa
ccgctcgacctttgtttggtcgtgggtatgttcctcacgggcttcgattccaagaagctg
aacacgttgtatgtggataagaatttggaataccacggattgttgcaagcgttctcacgt
accaaccgtgtattcaacgagcgcaaacgttttggtaagattgtctgtttccgcgacctc
aagagcaatgtggacgaatccataaaactgttcagcaacgggggtacgggcactatcatc
cgcgaggctttcgaggtggtgaaaaaggaatatgccgacatcgccaaagatttccttgcc
aaatatcccgacactgcggctgtcgatgcgttgaagaccgaacccgaaaagcgcgacttc
attctcgctttccgtgagttgataaagaaacatgcggagatacaaatctacgaggactat
tcggaggatgaccccgaattgggcatatccgaacaacagtacaacgacttccgaagtaag
tacctcgacattcacgacacgttccttgacagcactaccgtaggcggtacttccattgag
gataattccaccgaagacgaaataggacttgaagacatcgacttctgtcttgaactgttg
cacagcgacattatcaatgtggcttatatcctcgagctgattgcagaactcaatccgttc
agtgaaaactatgaggaacaacgccgccatatcatcgacacaatgattaaagatgccgag
ctgcgcagcaagtcgcaactgattgacggctttatccgccagaatgtagatgaagacaag
gagggcttcgtggagcgcaagaagaaagcggatggttctgttgacctcgaagaacggctc
aaccaatatatccgtcaggaaaaaggcaaagccattgaccgccttgcggaagatgagcag
ttgcctaccgaactgctgaaccgtttcctctcggagtatgacttctcacaaaaagtgcaa
cccgaaatcattcaaacagcagtcaaggagaagcacctcggcttgctaaagacgcgcaga
accgtgaaccgtattctcgaccgtctgcgcaatattatcagaacattttcttgggactaa

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