Parabacteroides merdae: INE87_02085
Help
Entry
INE87_02085 CDS
T07751
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmer03032
]
INE87_02085
03400 DNA repair and recombination proteins [BR:
pmer03400
]
INE87_02085
Enzymes [BR:
pmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
INE87_02085
DNA replication proteins [BR:
pmer03032
]
Prokaryotic type
DNA Topoisomerases
INE87_02085
DNA repair and recombination proteins [BR:
pmer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
INE87_02085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QUT49607
LinkDB
All DBs
Position
complement(2427505..2429850)
Genome browser
AA seq
781 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDYKVMSSYGHIRDLKTKEFSIDIEHDYAPQYVIPADK
KKLVSELKSEAKSAEQVWLASDEDREGEAISWHLYEVLGLKPENTKRIVFHEITKNAILH
AIETPRDININLVNAQQARRVLDRIVGFELSPILWRKVKPALSAGRVQSVAVRLIVERER
EINEFVSEAAFRVIANFILPDGTTVLKAELNRRLKDKKEVEAFLESCKNASFTIDDITTK
PVKKSPAPPFTTSTLQQEAARKLGYSVSQTMMIAQRLYESGLITYMRTDSVNLSDLALGT
AKEAIFETYGEKYYKFRQYHTKSKGAQEAHEAIRPTYISNVEAGSSSQEKKLYELIRKRT
IACQMADAELERTTISVGISGQTERFVAVGEVISFEGFLQVYMESNDDDTEKEQENGLLP
PVKLHETLSLKDIVATERFTQRPPRYTEASLVRRLEELGIGRPSTYAPTIQTIQNREYVV
KGDKEGVERAYTVVSLSKGKIEEAEKTETVGADRNKLMPTDIGTVVNDFLMEYFPDVLDY
NFTASVEKEFDSVAEGELVWTKAIDKFYKIFHPIVEATAAVKTEHKVGERELGIDPKSGN
PVFVKIGRYGPVVQIGAAHADDKEAPKPQFASLMKGQSIDTITLEEALKLFDLPRTVGEY
EGKVMVAAVGRFGPFIRHDGKFVSIPKDLNPLTITAEEAIALIEGKRVKDEQRFIKKFEE
DPEMEILKGRFGPYISYQKANYRIPKTVTDPTILTLEDCKKIIAEAGEKPAAKKTTRKKK
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaatctggtaatagtggagtcacccgctaaggcaaaaaccattgaaaagttc
ctcggaaaagattataaggttatgtcgagctatggtcatatccgcgatctgaagacgaaa
gagtttagtattgacatcgagcacgactatgctccgcagtacgtgataccggccgacaag
aagaagctggtcagcgaactgaaatccgaagccaagtctgccgaacaggtatggctcgct
tccgatgaggaccgtgagggagaggctatatcctggcacctgtatgaagtgctgggcctg
aaacctgaaaataccaaacgtatcgtctttcatgaaattaccaagaatgccattctgcat
gctattgaaacaccacgcgatatcaatattaacttggtgaacgcccaacaggcacgtcgt
gtgttggaccgtatcgtgggattcgaactttcgccgattttgtggcgtaaggtaaaaccc
gcattatcggccggacgtgtgcagtcggtggctgtgcgcctgattgtggaacgggagcgg
gagatcaatgaatttgtaagcgaggcggctttccgtgtgattgcaaactttatcctgcct
gacggcacgacggtgttgaaagccgaattgaaccgccgcctgaaagataagaaagaggtg
gaagcctttttggaatcctgtaagaatgcttcgtttacgattgacgatatcacgacgaaa
ccggtaaagaaatcgccggctcctccttttacgacttccactttgcagcaggaagcggct
cgtaagttaggatactccgtgtcgcagacgatgatgatcgcacagcgtttatatgaatcc
ggactgatcacttatatgcgtaccgactccgtgaacttgagcgatctggcattaggtacg
gcgaaagaggctatcttcgaaacatacggtgagaaatattataagttccgccaatatcat
accaagagcaaaggggcgcaggaagcacacgaagcgattcgcccgacttatatcagtaat
gtggaggcagggagttcttcgcaggaaaagaagttgtatgaactgatccgtaaacgtacg
atcgcttgccagatggcggatgccgaattggaacgtacgactatttcggtcggtatcagc
ggacagacggaacgttttgtcgctgtcggcgaagtgatcagtttcgaaggtttccttcag
gtttatatggagagcaatgacgacgatacggagaaagaacaggaaaacggcctgcttcct
ccggtaaagctccatgagacattgtcattgaaagatatcgtggcgacagagcgtttcacg
cagcgtcctccgcgctatacggaagccagtctggttcgccgtttggaagaattgggcatc
ggacgtccgtctacctatgcgccgactatccagacgatccagaaccgcgaatatgtggtg
aaaggagataaggaaggcgtggaacgtgcttacacagttgtttcgctgtccaagggaaag
atcgaggaagcggaaaagaccgagaccgtcggggccgaccgcaataaactgatgccgacc
gatatcggtacggtagtaaacgactttttgatggagtatttcccggatgtgttggattac
aactttacggccagtgtagaaaaagaattcgactcggttgcggaaggcgaactggtatgg
acgaaggccatcgataaattctataagattttccatccgatcgtagaggctacggctgcc
gttaagaccgaacataaagtaggggaacgcgagctcggtatcgatccgaagagcggcaac
ccggtgtttgtgaagatcggccgctatggtcctgtcgttcagattggggcggcacatgct
gacgacaaagaggcgccgaaacctcagtttgcctctctgatgaaaggccagtccatcgat
acgattacattggaagaggctctgaaactttttgatcttccccggacggtcggtgaatat
gaaggcaaggtgatggtggcggctgtcggccgtttcgggccgtttatccgtcatgacggt
aaatttgtttctattccgaaagatttgaatccgctgacgattacggcagaggaagcaatc
gctttgatcgaagggaaaagggtgaaagacgaacaacgttttatcaagaagttcgaggag
gatccggagatggaaatcctgaaaggtcgcttcggcccttatatttcttatcagaaagcg
aactatcgtattccgaaaacggtaaccgacccgacaatcctgacacttgaagattgtaaa
aagatcatagccgaagctggagaaaaaccggctgcaaagaagacaacgcgtaaaaagaaa
gcttga
DBGET
integrated database retrieval system
