Parabacteroides merdae: INE87_02136
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Entry
INE87_02136 CDS
T07751
Symbol
rpoE_5
Name
(GenBank) ECF RNA polymerase sigma-E factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmer
Parabacteroides merdae
Pathway
pmer02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
INE87_02136 (rpoE_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmer03021
]
INE87_02136 (rpoE_5)
Transcription machinery [BR:
pmer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INE87_02136 (rpoE_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_40
NirdL-like_HTH
PCI
HTH_10
VPS9
KORA
NBD_C
Motif
Other DBs
NCBI-ProteinID:
QUT49655
LinkDB
All DBs
Position
2499521..2500087
Genome browser
AA seq
188 aa
AA seq
DB search
MEYSADLKAFNQLFADYQGRFIRFANIYVRDIAVAEDFTIEALMQYWENRNTLKADSNVP
AYILTIIKNKCINYLQHIQVREDASEHLKNHAEWELNTRISTLEACNPEELFTAEAQEIV
NKTLASLPEQTRRIFIMSRYENKPYKEIAETLGMTTKGVEYHIAQALKKLHVNLKDYIPL
LVFLSYMN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggaatattcagcagatttaaaggccttcaatcaattattcgcagattatcaaggacgg
ttcatccgctttgcgaatatatatgtgagggatatagctgttgccgaagatttcactata
gaagcgctgatgcaatactgggaaaaccggaacacgctgaaggccgattccaatgttccg
gcctatatactcacgatcatcaaaaacaaatgtatcaactacctgcaacatatacaagtc
agggaagatgccagcgaacatctgaagaatcatgccgaatgggaactgaatacccgcatc
tccaccctcgaagcctgcaacccggaagaactgtttacagccgaagcacaagaaatcgtg
aacaagacattggcctccctgccggaacagacccgccgtatcttcatcatgagtcgctac
gaaaacaaaccttacaaagagatcgcagaaacactcggtatgacaaccaaaggcgtggaa
taccatatcgcccaggctctgaaaaagttacatgtcaatctgaaagactacatacctctg
ttggtattcttatcctatatgaactga
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