Parabacteroides merdae: INE87_02314
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Entry
INE87_02314 CDS
T07751
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer03030
DNA replication
pmer03430
Mismatch repair
pmer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
INE87_02314 (polC)
03430 Mismatch repair
INE87_02314 (polC)
03440 Homologous recombination
INE87_02314 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmer03032
]
INE87_02314 (polC)
03400 DNA repair and recombination proteins [BR:
pmer03400
]
INE87_02314 (polC)
Enzymes [BR:
pmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
INE87_02314 (polC)
DNA replication proteins [BR:
pmer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
INE87_02314 (polC)
DNA repair and recombination proteins [BR:
pmer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
INE87_02314 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QUT49832
LinkDB
All DBs
Position
complement(2740200..2740724)
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AA seq
174 aa
AA seq
DB search
MERFAAIDFEIANGKRSSICCIGVAIIEDNKVIDSVYTLVRPYPNFYTRFTTAIHGITMQ
DTIDSPDFEEAWARIAGRLQDIPLVAHNSSFDEGCLRAAHEAYDLAYPKYQFYCTCRLSR
RMYPFLVNHQLQTVAAHCGYDLTYHHHAMADAYACAHIAATMMREKGVERLCDL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggaacgctttgccgcaattgactttgagatcgctaatggaaagcgcagtagtatttgc
tgtatcggggttgctattattgaggacaataaggtaatcgattctgtttacacgctggtc
cgtccctatccgaacttctacactcggtttactactgccattcatggcataaccatgcag
gatacaatcgactctcccgactttgaggaagcctgggccaggatagccggcagattgcaa
gatatcccactggttgcccataacagttcttttgacgaaggttgcctgcgggcagctcac
gaagcctatgaccttgcctatcccaaatatcagttttattgcacctgccgtttgtcgagg
cgcatgtatcctttcctggttaaccaccaactacagactgttgccgctcattgcggatac
gatctgacctatcatcaccatgcaatggctgatgcttatgcctgtgctcatatcgcggca
accatgatgcgggaaaagggagtcgaaaggctgtgtgatttatga
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