Parabacteroides merdae: INE87_02351
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Entry
INE87_02351 CDS
T07751
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INE87_02351 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmer03019
]
INE87_02351 (pnp)
03016 Transfer RNA biogenesis [BR:
pmer03016
]
INE87_02351 (pnp)
Enzymes [BR:
pmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
INE87_02351 (pnp)
Messenger RNA biogenesis [BR:
pmer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
INE87_02351 (pnp)
Transfer RNA biogenesis [BR:
pmer03016
]
Prokaryotic type
tRNA degradation factors
INE87_02351 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
HutF_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QUT49863
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All DBs
Position
2784941..2787172
Genome browser
AA seq
743 aa
AA seq
DB search
MLNPINKTIELADGRTITIETGKLAKQADGAVTVRMGNTVLLATVCAAKDANPGVDFMPL
QVEYKEKFSAFGRFPGGFTKREGKASDYEILTSRLVDRALRPLFPDNYHAEVYVNVILFS
ADGEDMPDALAGLAASAALAVSDIPFNGPISECRVARIDGKYVVNPTFSELEKADIDIMV
GATLDNIMMVEGEMDEVQESEMLEAIKVAHEAIKIQCQAQLELSEACGKLVKREYCHEIN
DDELRKDVHEKCYAKAYAVATSGTDKHQRAEAFEAVVEEYKAQFSEEELTDEKVEMIGRY
YHDVEKEAMRRAILDEGKRLDGRKTTEIRPIWIETDCLPGPHGSAIFTRGETQSLSTVTL
GTKADEKMIDDVLNHGKERFLLHYNFPPFSTGEAKASRGVGRREIGHGNLAHRALKRMIP
TDYPYVVRVISDILESNGSSSMATVCAGTLALRDAGVPMKKPVSGIAMGLISENKGQNYA
ILSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILENALAQAKEGRMHILGK
IMEAQPEVRSDLKPHAPRIETMTIGKEFIGAVIGPGGKIIQGIQEKTGAVIAIEEEDGVG
KIEISGTNKATIDAAIRAIKGIVAVPEIGEIYEGKISSIMPYGAFVEFMPGKDGLLHISE
IDWKRLETVEQAGLKEGDTISVKLVDIDAKTGKFKLSHKVLLPKPEGYEERPPRSERGPR
PERGDRGPRQDRGDRGPRRERQD
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatccaattaacaagacgatcgaattggctgatggaagaaccatcaccatcgaa
accgggaaattggcaaaacaggcggacggtgcagttaccgtacgtatgggcaacaccgtg
ttgctggctactgtttgcgccgctaaagatgcaaacccgggtgttgacttcatgccgtta
caagtagagtacaaagaaaaattctcggcatttggccgttttcctggtggttttacaaaa
agagaaggtaaagcttccgactacgaaatcctgacttctcgtttggtcgaccgtgccctc
cgtcctcttttcccggacaattaccatgccgaagtatatgtaaacgttatattattctcc
gcagacggtgaagacatgccggatgcactggccggattggctgcttccgccgcattggct
gtatcggatattcctttcaacggaccgatctctgaatgccgcgtcgcacgtatcgatggt
aagtatgtagtcaaccctacgttctctgaattggaaaaagcagatattgatattatggtg
ggtgctacgcttgacaacatcatgatggtggaaggcgaaatggacgaagttcaagaatca
gaaatgctggaagcgatcaaagtagcacacgaagcaatcaaaatacagtgccaggcacag
cttgaactgtccgaagcttgcggcaaactggttaaacgcgaatactgccacgaaatcaac
gacgacgaactgcgcaaagatgtacacgaaaaatgttatgcaaaagcatacgctgttgca
acctccggtaccgacaaacatcagcgtgccgaagcattcgaagcagttgtcgaagaatat
aaagctcaattctctgaagaagaattgacagacgagaaggttgaaatgatcggccgttat
taccacgatgtagaaaaagaagcgatgcgccgtgctattctggacgaagggaaacgcctg
gatggccgtaagactactgaaatccgtccgatctggatcgaaacagactgtctgcccggc
cctcacggttctgctattttcacacgtggtgaaacacagtcactttcgactgtcacctta
ggtacaaaagccgatgaaaaaatgatcgacgatgtactgaatcacggaaaagaacgtttc
ctgttacattataacttcccaccattctctactggcgaagcaaaagcttcccgcggtgtg
ggtcgtcgtgaaatcggtcacggaaacctggctcaccgtgcattgaaacggatgatccca
acagactatccttacgtagtacgtgtgatctctgacatattagagtccaacggttcttct
tcaatggcaaccgtatgtgcaggtacgctggcgttgagagacgcaggtgttccgatgaag
aagcctgtgtccggtatcgcaatgggtctgatctccgaaaacaaaggtcagaactacgct
atcctatccgatatcctgggagatgaagaccacttaggcgacatggacttcaaggtgaca
ggtacaaaagacggtatcactgccactcagatggatatcaaggtagacggtctgtcatac
gaaattcttgaaaacgcattggcacaggcaaaagaaggccgcatgcacatcttgggcaag
atcatggaagcccagcctgaagttcgttctgatctgaagcctcacgctccgagaatcgaa
acaatgacaatcggcaaagaatttatcggtgcagtaattggcccgggtggtaagattatc
cagggtattcaggaaaagacaggtgctgttattgctattgaagaagaagacggagtgggt
aaaatcgaaatctccggaacgaataaagcgacaatcgatgccgctatccgcgctatcaaa
ggtatcgttgccgttcctgaaatcggcgaaatctacgaaggaaagatttcttctatcatg
ccttacggtgcattcgttgaattcatgccaggcaaagacggcttgctccatatttctgaa
atcgactggaaacgtttggaaacagttgaacaggccggtctgaaagaaggtgatactatc
agcgtcaagttggtagacatcgacgccaagacaggcaaattcaaattatctcacaaagta
ctgctaccgaaaccggaaggttacgaagaacgtccgccgagatccgaacgtggtccgaga
ccggaacgtggagatcgtggtccccgtcaggatcgtggagaccgtggtcctcgccgcgaa
cgccaggattaa
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