Parabacteroides merdae: INE87_02355
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Entry
INE87_02355 CDS
T07751
Symbol
cobD_1
Name
(GenBank) Cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00860
Porphyrin metabolism
pmer01100
Metabolic pathways
pmer01240
Biosynthesis of cofactors
Module
pmer_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
INE87_02355 (cobD_1)
Enzymes [BR:
pmer01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
INE87_02355 (cobD_1)
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Motif
Pfam:
CobD_Cbib
DUF373
Motif
Other DBs
NCBI-ProteinID:
QUT49867
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Position
2791540..2792493
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AA seq
317 aa
AA seq
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MYYWFHQSFYMAKAFPFIGGWLADRLLGDPEGWPHPVVGFGKVISLGEKTLNKGNDRTVK
GGVMALILVAGTYLLCERILALAGYFHPIVASILSGIGVFYCLAGKTLVKEVKAVFEAVD
RSTEEGRKQVGRIVGRDTSRLSPQEIRAAALETLAENLSDGVIAPMFWFALLGLPGMMAY
KMVNTLDSMIGYKNERYLEFGQIAARLDDLANYIPARLTAWLMLAVSGNLNKTDFVKRFG
PAHASPNSGYPESALAAILNCRFGGTHDYFGKPVEKPYIGINERTFTTEDMLIAIKTNSN
AELLMGLIVCLISIIIH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtattattggttccatcaatcgttttatatggcaaaagccttcccgttcatcggcgga
tggctggcagaccgcttgttgggtgatcctgaaggatggccacatccggttgttggtttc
ggcaaagtgatttctttaggagagaagacgctgaacaaaggaaacgaccggactgtcaaa
ggaggcgtcatggcactcatactggttgccggaacgtatttgctctgcgaacggatactg
gcgcttgccggatactttcacccgatagtagcatctattctatccgggataggcgtcttt
tactgcctggcgggaaaaacgctggtcaaagaagtgaaagccgttttcgaagcagtagac
cgcagcacggaagaaggacgcaaacaggtcgggcggatcgtaggccgcgacacttcccgt
ctctccccacaagagatacgggccgccgctctcgaaacgctcgcggaaaacctgagcgac
ggagtgatagctcccatgttttggtttgccctgctcggacttcccggcatgatggcttac
aaaatggtgaatacgctcgattcgatgatcggctacaaaaacgaacgttacttagaattc
gggcagattgccgcaaggctcgacgatcttgccaattatatccctgcccggttgacagca
tggttgatgctggctgtttccggcaacttgaacaaaacggatttcgttaagcgcttcggt
ccggctcatgccagcccgaactcaggctatccggaatctgcccttgccgctatattgaat
tgccgtttcggaggaacccacgattatttcgggaagccggtagaaaagccttatatcggg
atcaacgaacggactttcacaacagaagacatgttgattgccatcaaaacaaacagtaat
gccgaacttctcatggggcttattgtttgtttaatatcaataattatccactaa
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