Parabacteroides merdae: INE87_02571
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Entry
INE87_02571 CDS
T07751
Symbol
sigW_4
Name
(GenBank) ECF RNA polymerase sigma factor SigW
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmer
Parabacteroides merdae
Pathway
pmer02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
INE87_02571 (sigW_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmer03021
]
INE87_02571 (sigW_4)
Transcription machinery [BR:
pmer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INE87_02571 (sigW_4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
NTF2_YvbJ
HTH_23
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QUT50080
LinkDB
All DBs
Position
complement(3068599..3069081)
Genome browser
AA seq
160 aa
AA seq
DB search
MLIFYAGKYVNAIAAEDLVQDVFFKIWQKRTFLFLKEGIRTYLYRSVQHACLDYLKHQEV
KGDYINTVTTQLKIEEIYYNDDPQSLFAEDERLELIYKEMDKLPEKCREVFTMSYLEERK
TSEIAVLLNISPRTVEAQLYKALKILRGILLSCLIFLSNF
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttctatgcaggaaagtatgtaaatgctattgctgcagaagatttggtacag
gatgtgttttttaaaatctggcaaaagaggacttttttgtttttgaaagaagggattaga
acttatttgtatcgctccgttcagcatgcctgtctggattacctgaagcatcaggaggta
aaaggtgattatatcaataccgtcaccacccaattaaaaatagaagagatatattataat
gacgatccgcaatccctgtttgcggaagacgaacgtctggaacttatctataaagagatg
gataagttgccggagaagtgtcgtgaagtctttaccatgtcctatctggaagaacgaaaa
acgtccgaaatagctgtactgctcaatatatccccccgtacagtagaggcacaactttat
aaggcattgaagattttacgaggtattttgcttagttgtttgatttttctttcaaatttt
tga
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integrated database retrieval system
