Parabacteroides merdae: INE87_02576
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Entry
INE87_02576 CDS
T07751
Symbol
rpoE_6
Name
(GenBank) ECF RNA polymerase sigma-E factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmer
Parabacteroides merdae
Pathway
pmer02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
INE87_02576 (rpoE_6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmer03021
]
INE87_02576 (rpoE_6)
Transcription machinery [BR:
pmer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INE87_02576 (rpoE_6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
HTH_28
GerE
HTH_10
PhyR_sigma-like
UPF0122
DUF134
HTH_23
HTH_40
HTH_16
HTH_Tnp_ISL3
HTH_24
HTH_11
HTH_17
HetZ
Xre-like-HTH
HTH_Crp_2
PF0610-like_N
HTH_7
HTH_29
HTH_20
CAAP1
Motif
Other DBs
NCBI-ProteinID:
QUT50085
LinkDB
All DBs
Position
complement(3071940..3072527)
Genome browser
AA seq
195 aa
AA seq
DB search
MMEAKIDIEKVRKGDHAAFKTFFECFYPKLMALACRFVDEQVAKDLVQEVFTSYWEQKKV
IQPDNIQSFLFKWLQNSCLNHIKHQMVVDEYESRVRIAEARIAFWGESTDSNDVLRSVIN
QDLREIIELSVNKLPPKCAQAFRLAYFHDMSRKEIAEIMGISPRTVEGHIRQALAFLRED
LKGLFLLIFLLCNIN
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagcgaaaattgacattgaaaaagtcaggaaaggagatcatgctgcttttaaa
actttctttgaatgtttctatcctaaattgatggcgctcgcttgtcgttttgtagatgag
caggttgccaaagatttggtgcaagaagtcttcacttcctattgggaacagaaaaaggtt
atacaacccgacaatatccaatctttcctttttaaatggctgcaaaatagttgcttgaac
cacatcaaacaccagatggttgttgacgagtacgaatcacgtgttcgcatcgctgaggcg
cgtatcgctttttggggcgagtccaccgactccaacgatgtccttaggtctgttattaat
caggatttgcgggaaatcatagaactctccgttaataaactgcctcccaaatgcgcacag
gctttccgtctggcctatttccatgatatgagccgtaaggagatagccgagattatggga
atttctccccgtacagtcgaaggacatatccggcaagcgcttgccttcctgcgggaagac
ttgaaaggccttttcctgcttatttttctgctctgcaacataaattga
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